Query= MSMg01no325_h02.b1 MSMg01no325_h02.b1 CHROMAT_FILE:
MSMg01no325_h02.b1 PHD_FILE: MSMg01no325_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:57 2005
(681 letters)
>mm_chr13_91520962_91522043
Length = 1082
Score = 1189 bits (615), Expect = 0.0
Identities = 663/681 (97%), Gaps = 6/681 (0%)
Strand = Plus / Minus
Query: 5 gaattccaatggg---taccaatgtaggcttagatgacatcaaggtatccagagatagaa 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gaattccaatgggaaaaa--aatgtaggcttagatgacatcaaggtatccagagatagaa 670
Query: 62 tccagtcctaccagcatgtaaggccttcaatggctctcacaatccctgttaggagtttgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tccagtcctaccagcatgtaaggccttcaatggctctcacaatccctgttaggagtttgc 610
Query: 122 aaagctaattacccatcttccactaatgattatgaatattttaccttgtgtaaagcaact 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaagctaattacccatcttccactaatgattatgaatattttaccttgtgtaaagcaact 550
Query: 182 gccacacctcctttaaagacagatataagctaaagaatgggaactcaattttcaactcct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gccacacctcctttaaagacagatataagctaaagaatgggaactcaattttcaactcct 490
Query: 242 tatttctagggtgaaaccatctctccccacatccagcatgcagactctccagagtctgaa 301
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tatttctagggcaaaaccatctctccccacatccagcatgcagactctccagagtctgaa 430
Query: 302 ggttctcaacaagcagtgggcgaagtttattttatagaccaaaggttgatcattgatatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggttctcaacaagcagtgggcgaagtttattttatagaccaaaggttgatcattgatatg 370
Query: 362 aaaaacatagacacagacacatacacacaaaacagataaacaaacaaaacaatgcacata 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacatagacacagacacatacacacaaaacagataaacaaacaaaacaatgcacata 310
Query: 422 gccatatgtttctgctagcagattcacccaaaactagtaatagtctcacggggaggggtg 481
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gccttatgtttctgctagtagattcacccaaaactagtaatagtctcacggggaggggtg 250
Query: 482 tggagaaaagaaaaatctctgattctgcagatagcattcaatagtagctgggcctggtgg 541
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 249 tggagaaaagaaaaatctctgattctgcggatagcattcaatagtagctgggcctggtgg 190
Query: 542 cacacatctttaatctcagtacttgggaggcagaaggcagccgccgggtctacagagcta 601
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 189 cacacacctttaatctcagtacttgggaggcagagggcagccgccgggtctacagagcta 130
Query: 602 gttccaggggagccaggactccatagagaaactgtgtccaaaagagagagagag-ggggg 660
||||||||| |||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 129 gttccagggtagccaggactccatagagaaactgtgtccaaaagagagagagagagagag 70
Query: 661 ggagagagagagagagagaga 681
||||||||||||||||||||
Sbjct: 69 agagagagagagagagagaga 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1082
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1072
Effective search space: 719312
Effective search space used: 719312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_h02.g1 MSMg01no325_h02.g1 CHROMAT_FILE:
MSMg01no325_h02.g1 PHD_FILE: MSMg01no325_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:57 2005
(654 letters)
>mm_chr13_91351463_91352516
Length = 1054
Score = 1137 bits (588), Expect = 0.0
Identities = 641/664 (96%), Gaps = 11/664 (1%)
Strand = Plus / Plus
Query: 1 catataatgttaaagagacagtgacctaaaaccagcgtcacagaagtgaggacatcaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 192 catataatgttaaagagacagtgacctaaaaccagcgtcacagaagtgagtacatcaaca 251
Query: 61 atctctatacccggagttttgtggagtgaggaaaaagtgaaagactttttccactgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atctctatacccggagttttgtggagtgaggaaaaagtgaaagactttttccactgaaag 311
Query: 121 acttgaggactgttttaaaactactcagtggttgcacttattgtgaccatgttacttact 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 312 acttgaggactgttttaaaactactcagtggttacacttattgtgaccatgttactta-t 370
Query: 181 atcatataagatttatatgtgccgggcagtggtggcacacgcctttaagcccagtatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atcatataagatttatatgtgccgggcagtggtggcacacgcctttaagcccagtatttg 430
Query: 241 ggaggcagaggcaggcagatttctgagttcgaggccagcccggtctacagagtgagttc- 299
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 ggaggcagagacaggcagatttctgagttcgaggtcagcccggtctacagagtgagttcc 490
Query: 300 ----cagccgggactacacagagaaaccctgtctcaaaaagac-----aaaaaaaaaaat 350
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 491 aggacagccgggactacacagagaaaccctgtctcaaaaagacaaaaaaaaaaaaaaaat 550
Query: 351 ttatatgtgaaaactgctccacaccacctcagctccccaagccagcttggagcgctgctg 410
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 551 ttatatgtgaaaactgctccacaccacctcagctccccaagccagcctggagctctgctg 610
Query: 411 tgtaccgccgtaaagacacttaacccaaagctgtcatctcttttgatctcaaaatacctt 470
|||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 611 tgtaccgccgtaaagacacttaactcaaggttgtcatctcttttgatctcaaaatacctt 670
Query: 471 tccttgtgaatacagaatgaggtaaagctccaaagcgatgggcatttcagaattgtcttt 530
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttcttgtgaatacagaatgaggtaaagctccaaagcgatgggcatttcagaattgtcttt 730
Query: 531 tctgtgagggtgacctcctgagaccagtgcagatcaacccagaaggcaaggaagcaggaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tctgtgagggtgacctcctgagaccagtgcagatcaacccagaaggcaaggaagcaggaa 790
Query: 591 agggggtgaagaaatgaagctacaagcactttcactgtggcagggatcagacattcctgg 650
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 791 agggggtgaggaaatgaagctacaagcacttccactgtggcagggatcagacattcctgg 850
Query: 651 atgt 654
||||
Sbjct: 851 atgt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
