Query= MSMg01no328_c04.b1 MSMg01no328_c04.b1 CHROMAT_FILE:
MSMg01no328_c04.b1 PHD_FILE: MSMg01no328_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:11 2005
(599 letters)
>mm_chr13_30759443_30760441
Length = 999
Score = 1104 bits (571), Expect = 0.0
Identities = 592/599 (98%)
Strand = Plus / Minus
Query: 1 agaagacttcagcagagctaagatgaaatacttcacaaacaccccatgattttcaaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agaagacttcagcagagctaagatgaaatacttcacaaacaccccatgattttcaaagta 740
Query: 61 ccaaggcaaatctttgtcagtcttttgcaaagataacaaaatccaattacaaaaatgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 739 ccaaggcaaatctttgtcagtcttttgcaaagataacaaaatccaattacaaaaatgctc 680
Query: 121 tgtaaactaaaaccatgtccagtgacctccctgctacaatttccagttacacttcgtctg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 679 tgtaaactaaaaccatgtccagtgacctccctgctacaatttccagttacactttgtctg 620
Query: 181 ctggttctgcacatacccagacgctgtagtcacaacaggcctcctgtcccctgcctcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctggttctgcacatacccagacgctgtagtcacaacaggcctcctgtcccctgcctcccg 560
Query: 241 cctcctcagtgctatcctctcaagggctctatttttatgaagcagagtggaacaggtacc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cctcctcagtgctaccctctcaagggctctatttttatgaagcagagtggaacaggtacc 500
Query: 301 aaagccctcctgttttaaaacaacagcgtgtgctcatcttgcagatggaccaagctgggc 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 aaagccctcctgttttaaaacaacagtgtgtgctcatcttgcagatggaccaagctgggc 440
Query: 361 tccccagcagcttctggctacctggagctcttctcccttcatctcccattccccagggtc 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 439 tccccagcagcttctggctacctggagctcttctcccttcatctgccattccccagggtc 380
Query: 421 tcctgtctttactaggatgtgacatcaaaatactaaaggggacattcagaacatggctct 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcctgcctttactaggatgtgacatcaaaatactaaaggggacattcagaacatggctct 320
Query: 481 tctggccaatttacacaatctggcaatactggacaaacaaatgatcataagttcatcaca 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tctggccaatttacataatctggcaatactggacaaacaaatgatcataagttcatcaca 260
Query: 541 attcaaccatatggaaatggagacgttcacaatcaatgctgagaagggagttatgctga 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attcaaccatatggaaatggagacgttcacaatcaatgctgagaagggagttatgctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_c04.g1 MSMg01no328_c04.g1 CHROMAT_FILE:
MSMg01no328_c04.g1 PHD_FILE: MSMg01no328_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:12 2005
(512 letters)
>mm_chr13_30649063_30649974
Length = 912
Score = 905 bits (468), Expect = 0.0
Identities = 501/512 (97%), Gaps = 2/512 (0%)
Strand = Plus / Plus
Query: 1 taaaaaaaatgaacatggtattaggttttggaaaatgtaaacaggtttacttgcaaccgc 60
||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 201 taaaaaaaatgaacatgctattagtttttggaaaatgtaaacaggtttacttgcatctgc 260
Query: 61 tataatgatagaaggctgagctgtcaaaacctgtatactgatcacagccaagcaaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataatgatagaaggctgagctgtcaaaacctgtatactgatcacagccaagcaaacagg 320
Query: 121 caacgtacctgtcataagactcaaacccatgaccctggggttaagagtctcatgttctat 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacatacctgtcataagactcaaacccatgaccctggggttaagagtctcatgttctat 380
Query: 181 tgactgagctagctgggcactaaaacttgtctactgaaacctttcatcctgaattcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactgagctagctgggcactaaaacttgtctactgaaacctttcatcctgaattcatgc 440
Query: 241 tttgcattggattattaaatattcccccacaaataaaagtggaaagctgtctctgtttct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 441 tttgcattggattattaaatattcccccacaaataaaagtggaaagctgtct-tgttcct 499
Query: 301 gtcccacagggggacatagcagaaagcagagaatgaagggtttcacatgacaatagattc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 500 gtcccacagggggacatagcagaaagcagagaatgaagggtttcatgtgacagtagattc 559
Query: 361 tcatgaacagctcatgtatggcatgggtttggatgcttgggcataactatgccagccttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcatgaacagctcatgtatggcatgggtttggatgcttgggcataactatgccagccttg 619
Query: 421 gcatggttaggagagagattagtgtctataaagaagccaaccagatgggccacaagctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcatggttaggagagagattagtgtctataaagaagccaaccagatgggccacaagctgc 679
Query: 481 ccc-tacaaagcacctccaggtgtactctgga 511
||| ||||||||||||||||||||||||||||
Sbjct: 680 cccctacaaagcacctccaggtgtactctgga 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
