Query= MSMg01no328_n15.b1 MSMg01no328_n15.b1 CHROMAT_FILE:
MSMg01no328_n15.b1 PHD_FILE: MSMg01no328_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:07 2005
(506 letters)
>mm_chr13_41924977_41925882
Length = 906
Score = 932 bits (482), Expect = 0.0
Identities = 497/502 (99%)
Strand = Plus / Plus
Query: 5 gaattccatggttgaccctaaaactgcaaataacgacggcatctcctgctttacgagtac 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatggctgagcctaaaactgcaaataacgacggcatctcctgctttacgagtac 264
Query: 65 ctctagttaagcatggctccaagccctttaccaatttggttctctgaacattctaaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctctagttaagcatggctccaagccctttaccaatttggttctctgaacattctaaaaac 324
Query: 125 cgtaatgatgttagggctacaaggatgtgctctgcaagcggtgagaaggcagagtgagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtaatgatgttagggctacaaggatgtgctctgcaagcggtgagaaggcagagtgagtt 384
Query: 185 ccacacaggtactcactctcaaggtggacctcaagggcccagggaaacccttgttctcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacacaggtactcactctcaaggtggacctcaagggcccagggaaacccttgttctcca 444
Query: 245 taccgctggcccccttttcagtacttcctctcccctaagggccttttatattttcatctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taccgctggcccccttttcagtacttcctctcccctaagggccttttatattttcatctt 504
Query: 305 cttatcagaaaattctcccaatcttcaacctaagaccagttcctccagtgtctcccttcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttatcagaaaattctcccaatcttcaacctaagaccagttcctccagtgtctcccttcc 564
Query: 365 caagttcgccatcttttaaaaaattatcacgcttacaagcaagacctactgtgcccattt 424
|||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 caagtttgtcatcttttaaaaaattatcacgcttacaagcaagacctactgggcccattt 624
Query: 425 cgctttgcttgtttgtgccctcctgaactaggcacataaaatggtcctcaccacttccct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cgctttgcttgtttgtgccctcctgaactaggcacataaaatggtcctcaccacttccct 684
Query: 485 aacatttatttcttctctgaca 506
||||||||||||||||||||||
Sbjct: 685 aacatttatttcttctctgaca 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_n15.g1 MSMg01no328_n15.g1 CHROMAT_FILE:
MSMg01no328_n15.g1 PHD_FILE: MSMg01no328_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:07 2005
(331 letters)
>mm_chr13_42100083_42100812
Length = 730
Score = 630 bits (326), Expect = 0.0
Identities = 329/330 (99%), Gaps = 1/330 (0%)
Strand = Plus / Minus
Query: 2 cagttctgtgccgtgtgttatttctgaccccttctctgtgatgttccctgtgccttgggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cagttctgtgccgtgtgttatttctgaccccttctctgtgatgttccctgtgccttgggg 531
Query: 62 aagggatgggggaaggaagttgatgtaaaagtcctacctatggctcttttttactttttc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aagggatgggggaaggaagttgatgtaaaagtcctacctatggctcttttttactttttc 471
Query: 122 atcttttgctatagaaaccctttttttttttccaaaattggttacatactttaaaatgtt 181
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atcttttgctatagaaa-cctttttttttttccaaaattggttacatactttaaaatgtt 412
Query: 182 ttcaatgtatcccatattttgaatgtatttttgtatcttttttgtgtaaacatttagact 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttcaatgtatcccatattttgaatgtatttttgtatcttttttgtgtaaacatttagact 352
Query: 242 gtgatgatattaaacccttatttttctcctaatacattctggtcctgttctagtcagtgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gtgatgatattaaacccttatttttctcctaatacattctggtcctgttctagtcagtgg 292
Query: 302 tctctttctgtgcagagacaccgtggccac 331
||||||||||||||||||||||||||||||
Sbjct: 291 tctctttctgtgcagagacaccgtggccac 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 730
Length adjustment: 9
Effective length of query: 322
Effective length of database: 721
Effective search space: 232162
Effective search space used: 232162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
