Query= MSMg01no329_h10.b1 MSMg01no329_h10.b1 CHROMAT_FILE:
MSMg01no329_h10.b1 PHD_FILE: MSMg01no329_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:55 2005
(444 letters)
>mm_chr13_39666289_39667132
Length = 844
Score = 514 bits (266), Expect = e-150
Identities = 314/344 (91%), Gaps = 23/344 (6%)
Strand = Plus / Minus
Query: 102 cgccttaggttgcagtcagctaactctaggttttaatcatgtctacagagcaccttgaga 161
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 844 cgccttaggttgcagtcagctaactctaggttttaatcatatctacagagcaccttgaga 785
Query: 162 gccacacccaggttaataatattcatgttgtgcatcagagtctagcaatactaagacata 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gccacacccaggttaataatattcatgttgtgcatcagagtctagcaatactaagacata 725
Query: 222 taaatttaaccaccataccagtcaaaaactcatattctgaataacattaatgaaaaaa-c 280
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 724 aaaatttaaccaccataccagtcaaaatctcatattctgaataacattaatgaaaaaagc 665
Query: 281 cacaaggttttatttatctttttatatatcttttattttaaagatagagggtcaatacta 340
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 664 cacaaggt----------------------ttttattttaaagatagagggtcaatacta 627
Query: 341 tgcttaatattcatttgactatcaagttgcaatttgactcacaggcgccccgactaattg 400
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||
Sbjct: 626 tgcttaatattcatttgactatcaagttgcaatttgactcaaaggagcccggactaactg 567
Query: 401 tatcctctgcatctctgacataattctaggattcacctttccat 444
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tatcctctgcatctctgacataattctaggattcacctttccat 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_h10.g1 MSMg01no329_h10.g1 CHROMAT_FILE:
MSMg01no329_h10.g1 PHD_FILE: MSMg01no329_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:55 2005
(341 letters)
>mm_chr13_39521495_39522235
Length = 741
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Plus
Query: 1 tcttctctttttcctctaatgatggggaaaaaatgaagcaaaagaagcaatggacaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttctctttttcctctaatgatggggaaaaaatgaagcaaaagaagcaatggacaggga 260
Query: 61 aagaaatgcagaaaagaaatagaatacccgaaatgctatatgataaaattgaacagaagt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aagaaatgcagaaaagaaatagaatacccaaaatgctatatgataaaattgaacagaagt 320
Query: 121 aaatttgatgaatttattttataattaaagcaagtggcagaaggcctttctagtatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttgatgaatttattttataattaaagcaagtggcagaaggcctttctagtatacaa 380
Query: 181 ggctttactctcctgaaaatattttcataatctattctaagattcataactcaatatttt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctttactctcctgcaaatattttcataatctattctaagattcataactcaatatttt 440
Query: 241 aatatcacaaaattcataattcctttttctttacaaccctacagttcaaagcgtttttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatcacaaaattcataattcctttttctttacaaccctacagttcaaagcgtttttaa 500
Query: 301 atggctacgccctgatctgataagattgttttcagtagctt 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggctacgccctgatctgataagattgttttcagtagctt 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
