Query= MSMg01no329_o05.b1 MSMg01no329_o05.b1 CHROMAT_FILE:
MSMg01no329_o05.b1 PHD_FILE: MSMg01no329_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
(302 letters)
>mm_chr13_47563139_47563841
Length = 703
Score = 439 bits (227), Expect = e-127
Identities = 280/309 (90%), Gaps = 25/309 (8%)
Strand = Plus / Plus
Query: 4 gaattcaagagca---ttcccgagctacttaatgagaacctatgtaacaaaagggcttgt 60
||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaagagcaagctt---gagctacttaatgagaacctatgtaacaaaagggcttgt 260
Query: 61 gtttcatttctcccc-cccccccaatactaaactactcgactatcgctctcatcagaaat 119
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttcatttctccccacccccccaatactaaactactcgactatcgctctcatcagaaat 320
Query: 120 catctttccagatctctgtgagat-ctggataaacaagaatcctcgagacagaagcttgg 178
|||||||||||||||||||||||| || | | | ||||||||||||||||||||
Sbjct: 321 catctttccagatctctgtgagattcttgttta-------tcctcgagacagaagcttgg 373
Query: 179 caagtgttgcttcgagatctaggagggggtttcttttaattctgttacctaccgtaatag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caagtgttgcttcgagatctaggagggggtttcttttaattctgttacctaccgtaatag 433
Query: 239 agatgaaacccaggcagaatcctggcagaag---gtgactgtttttggggg--agggtca 293
||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||
Sbjct: 434 agatgaaacccaggcagaaccctggcagaagaaggtgactg-----gggggggagggtca 488
Query: 294 ctgatgcta 302
|||||||||
Sbjct: 489 ctgatgcta 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 703
Length adjustment: 9
Effective length of query: 293
Effective length of database: 694
Effective search space: 203342
Effective search space used: 203342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_o05.g1 MSMg01no329_o05.g1 CHROMAT_FILE:
MSMg01no329_o05.g1 PHD_FILE: MSMg01no329_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
(334 letters)
>mm_chr13_47726707_47727440
Length = 734
Score = 623 bits (322), Expect = 0.0
Identities = 331/334 (99%)
Strand = Plus / Minus
Query: 1 acatcaaagggggtgggtgtgaggcctactgatttgtagacttttaattacagttcacct 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acatcaaaggaggtgggtgtgaggcctactgatttgtagacttttaattacagttcacct 475
Query: 61 tcattcttttcttccccttcccacctcctttttctgctgtgtctctccttctccctggat 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccttcttttcttccccttcccacctcctttttctgctgtgtctctccttctccctggat 415
Query: 121 gagctgagttaaatccagagcattccatctcttagtatcactcagagagcgagggtaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gagctgagttaaatccagagcattccatctcttagtatcactcagagagcgagggtaggg 355
Query: 181 aatcactgttgtaaacggggtgggaggataatgatttgaagaagacagatgtctataact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aatcactgttgtaaacggggtgggaggataatgatttgaagaagacagatgtctataact 295
Query: 241 gtattaatctttccctgttgggaaccaacagtcatctgagagctatggattaggttgcac 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 294 gtattaatctttccctgttgggaaccaacagtcatttgagagctatggattaggttgcac 235
Query: 301 ccattttgtcagctgaccaaaagccacggaccag 334
||||||||||||||||||||||||||||||||||
Sbjct: 234 ccattttgtcagctgaccaaaagccacggaccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
