TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTCTTCCTATTTGTTAAGCCATTTAGTGGAAATGTTTATGTGTATGTG
GTTTGAAAAGGGAGGTGGCATACAATATCATGAATGGATTAATGTAGTAT
ACAGTTCTCAAAGGTAAAAGTCACTAAATTTCAAAGAGGTAAACAAATTC
TAAGCTATTGTTCACAGAGAGAGAGAAATATCATTGCAGCCAGTATAGTT
GTACTACTAAAAAAAAAAACAAGGGTGTACTCCCTTTGTGAGATATCTTG
TCATAGTAGTTAAAATACTGGAAATGTGTATGGATGATAAAATTATTTAT
TGAACACTTACTCTAATTAATTACAGAGAAAATTTTCATCTGTCATATTG
CTTAATAGAGTTTAACAATGCCAGAACCATCCTATGTGCTTGATAAAGAA
TGAACACAGTTAAGAAAGATCCTAATATAGATTTTGCTGCTCTGTGGTCA
CTTTCATTCCCACATTATATTAGTTTTATCTAGGTTAACAACAGAGTAAG
GTCCTTTATTGCTCCACTGTGGCACTCTAAAGAAAATAATTATATAAGCC
ATTTGAGAACAGATTGCTCTTCACATTTTAATAAACCAACATGAGGAACA
CTTGAGTTCTTGACGAAAAAAGTCCAAGTCAGGAACTCTCACCTTCGATG
CTTGTGTAGAAGCAAGGGTGAAGGCATTTTTCCCAGA

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAGGGCCAAAAAGGGGGAGTGGGTGGGCA
GGGGAGTGGGGGTGGTCCCCCCCCTCTCCCCCCTTTNNNNNTTCTNCCCA
ATATTTCTTTCCCTCCCCTCCTTCCACTTTAATTTTTTCCTCCCCCCTCT
TTTCTCCTTTCTATTNTTTTTTTTCCTCCCCTCGCTTCCCCCTCTTCTTT
TCCCTTTCCTTTTCCTTTCCTTTTCTTCTTNTCTAACAAAAAACACAAAA
CCTAACAAAAATTGACTCTACCTTAAAAACCCCTTTTCTTTTTTTTTACC
ACCACTTATCCTAGTTGAGTTTTAGCACAAATTAACAAATAAGTATACCC
TACCCCATTATTATATGGCGGACACGAAGATAAAGTGGTCGTAAGCTTTA
GTGGGGACCACCCCCCACAGTCGGATTAATCCGGGATATTAACGAAAAAT
GAACCCCTAATCCCTACGCATTGTACGGCATATAGCCGCTCCATATGTGT
TTCGCATGAGCCAGCCTTTCACGGAGGTTCAAGTCCAAACAATGTACACC
AGAAGCAAGAGAGTGAAAGCCTTTTATTAAGGAAACGCAGCACACACATC
ATTTTACCTATCCCTGACCCTGCTTATTTTTTCAACAGAGACAGCATATG
CGTTTAAGTTCACCGGATCGCCCACATTGAATTTGACCGGGTTGCATTTG
GACACCTGATTTGTTATAATCATCAAGACATACACGCATATTTGACAATT
AATGTTTTGTGTCCTTTTAACCTCTTATACAAATCACTCTCCCCCCATAG
TGTCTTCCTCCCGTCACCG

Query= MSMg01no331_l13.b1 MSMg01no331_l13.b1 CHROMAT_FILE:
MSMg01no331_l13.b1 PHD_FILE: MSMg01no331_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:40 2005
         (635 letters)



>mm_chr13_85719087_85720119
          Length = 1033

 Score = 1187 bits (614), Expect = 0.0
 Identities = 627/632 (99%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttcttcctatttgttaagccatttagtggaaatgtttatgtgtatgtggttt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttcttcctatttgttaagccatttagtggaaatgtttatgtgtatgtggttt 263

                                                                       
Query: 64  gaaaagggaggtggcatacaatatcatgaatggattaatgtagtatacagttctcaaagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaaaagggaggtggcatacaatatcatgaatggattaatgtagtatacagttctcaaagg 323

                                                                       
Query: 124 taaaagtcactaaatttcaaagaggtaaacaaattctaagctattgttcacagagagaga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaaagtcactaaatttcaaagaggtaaacaaattctaagctattgttcacagagagaga 383

                                                                       
Query: 184 gaaatatcattgcagccagtatagttgtactactaaaaaaaaaaacaagggtgtactccc 243
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 384 gaaatatcattgcagccagtatagttgtactactaaaaaaaaa--caagggtgtactccc 441

                                                                       
Query: 244 tttgtgagatatcttgtcatagtagttaaaatactggaaatgtgtatggatgataaaatt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttgtgagatatcttgtcatagtagttaaaatactggaaatgtgtatggatgataaaatt 501

                                                                       
Query: 304 atttattgaacacttactctaattaattacagagaaaattttcatctgtcatattgctta 363
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 502 atttattgaacacttactctaattaattacagagaaaaatttcatctgtcatattgctta 561

                                                                       
Query: 364 atagagtttaacaatgccagaaccatcctatgtgcttgataaagaatgaacacagttaag 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atagagtttaataatgccagaaccatcctatgtgcttgataaagaatgaacacagttaag 621

                                                                       
Query: 424 aaagatcctaatatagattttgctgctctgtggtcactttcattcccacattatattagt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaagatcctaatatagattttgctgctctgtggtcactttcattcccacattatattagt 681

                                                                       
Query: 484 tttatctaggttaacaacagagtaaggtcctttattgctccactgtggcactctaaagaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttatctaggttaacaacagagtaaggtcctttattgctccactgtggcactctaaagaa 741

                                                                       
Query: 544 aataattatataagccatttgagaacagattgctcttcacattttaataaaccaacatga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aataattatataagccatttgagaacagattgctcttcacattttaataaaccaacatga 801

                                           
Query: 604 ggaacacttgagttcttgacgaaaaaagtcca 635
           |||||||||||||||||||| |||||||||||
Sbjct: 802 ggaacacttgagttcttgacaaaaaaagtcca 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1033
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1023
Effective search space:   639375
Effective search space used:   639375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)