Query= MSMg01no332_p24.b1 MSMg01no332_p24.b1 CHROMAT_FILE:
MSMg01no332_p24.b1 PHD_FILE: MSMg01no332_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:04 2005
(423 letters)
>mm_chr13_97856956_97857774
Length = 819
Score = 733 bits (379), Expect = 0.0
Identities = 400/409 (97%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 15 aggcagcgctcaggaatgctctctcaacctcacacacaacgccagtttctagccatgagt 74
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aggcagcgctcagtaatgctctctcaacctcacacacaacgccagtttctagccatgagt 560
Query: 75 gtttcctcccttgtctccctgatttcgttccctaaccaacacaagctctgttctacgcca 134
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 559 gtttcctcccttgtctccctgatttcgttccctaaccaacacaagctctgctctacgcca 500
Query: 135 cctcaacccatctttgccttaactttttcttctccccatgtcctccacaggccctaagtc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cctcaacccatctttgccttaactttttcttctccccatgtcctccacaggccctaagtc 440
Query: 195 ctagatgccctagacgtatccaaacactcaccttcctctgagagccaagaagttgagtgt 254
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctagatgccctagacgtacccaaacactcaccttcctctgagagccaagaagttgagtgt 380
Query: 255 gccaataatgaaataactgaatagctactactaactacccaaaactacgtggtcctcggc 314
||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 379 gccaataatgaaataactgaaaagctactacta----cccaaaactacgtggtcctcggc 324
Query: 315 agtgctcagcaagccctttctagtccctgtaaaagatttgcttacagtcgggtaaggccc 374
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 323 agtgctcagcaagccctttctagtccctgtaaaagatttgcttacagttgggtaaggccc 264
Query: 375 acctctgagtttgtaggtggatggttaagggtttatttttaaagattta 423
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acctctgagtttgtaggtggatggttaagggtttatttttaaagattta 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 819
Length adjustment: 9
Effective length of query: 414
Effective length of database: 810
Effective search space: 335340
Effective search space used: 335340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_p24.g1 MSMg01no332_p24.g1 CHROMAT_FILE:
MSMg01no332_p24.g1 PHD_FILE: MSMg01no332_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:04 2005
(655 letters)
>mm_chr13_97690278_97691331
Length = 1054
Score = 1230 bits (636), Expect = 0.0
Identities = 650/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 1 accacaaagnctacattctggccctcctcttcctgacacctgcccccaccccaccccatc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accacaaagtctacattctggccctcctcttcctgacacctgcccccaccccaccccatc 260
Query: 61 ccacttctcattcgaaaaatcagaataaagctagtccttccccttcataagtctgtgggg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacttctcattcgaaaaatcaaaataaagctagtccttccccttcataagtctgtgggg 320
Query: 121 atctatttaaactgcattaatcctagaacagtgcacagcatggaggatgattccaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctatttaaactgcattaatcctagaacagtgcacagcatggaggatgattccaagaat 380
Query: 181 tggttttcttctccaattcatgcatagatgatgccaatttggaaaggtgaattatggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttttcttctccaattcatgcatagatgatgccaatttggaaaggtgaattatggagc 440
Query: 241 taatttaatgacaccttcccactgggaagcagatgtggttaaagccatcccctacttgcc 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 taatttaatgacaccttcccactgggaagcagatgtgggcaaagccatcccctacttgcc 500
Query: 301 tctcaataagtttgtaaaatgggcatgaagacacttgcacacttttttttttaaaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcaataagtttgtaaaatgggcatgaagacacttgcacacttttttttttaaaataaa 560
Query: 361 agtctcatgtttataagtttatgctaataaaagtacaaaaaagggcatgtaagagattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 agtctcatgtttataagtttatgctaataaaagtacaaaaaagggcatgtaagagat-at 619
Query: 421 ataataggctagagagatgggtcagtggttaaaagcactgactagtcttcgagagggcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ataataggctagagagatgggtcagtggttaaaagcactgactagtcttcgagagggcct 679
Query: 481 gagttcaattcccagctaccatatggtagctcacaactatctctaacaggatccaatgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gagttcaattcccagctaccatatggtagctcacaactatctctaacaggatccaatgtc 739
Query: 541 ctgttctggtgtgtctaaaaagaactacagtgtactcataaataaataaatctgaaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctgttctggtgtgtctaaaaagaactacagtgtactcataaataaataaatctgaaaaag 799
Query: 601 aaaagatatttaccgccaaaaatgtaggggaaaatctctatgttcccttccaaga 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaaagatatttaccgccaaaaatgtaggggaaaatctctatgttcccttccaaga 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1054
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1044
Effective search space: 673380
Effective search space used: 673380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
