TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGCGG
AATTCCTATAGAATTTACCTGGGTTGGAGGATGGGAAAATCTGAGCAGTG
TCCCGGACGACAAACAGAGTTCAGAGAGACACAGGACAGGAGCAGATAAA
GCTCCATCCAGATAGAAACAAAGGTCAGAGGGTGTCCACATAAGCCAAGA
ACGATGGGCAGCCAGCAGAGGCAGAAAGGAACCAGCCTAGCGATCTTTGG
AGTGAGCAGGGACCTGCCAGTGTTTTGATTCCAGTCTTCTTTGCTCCAGA
GCCCTGAGGAAATAGCTTATACTGTTGGAAACTACCAATTTCATGGCGAT
TTGTTATGGTTGTGCTATGAAGCAGCAGGGTATAGCACAGCACAAGCATT
CATGGATCAAAGCAAAACTGAGCCAGGCAGTCTGAAGAGCAGAAATCTTT
CAGCTGTGATCATGGCTCAGCTAACAGAGAACTATAAAGTGCCCACCTTG
AGCCACACATAGCTGCGCTAAGCACAGAAGGGAACCTGATGACCCCCGAT
TGCCCACTGGTTCACATAGCCCCTTGATGCCAGAACACACTCACCACAGA
GCAACCTGTCTCCCTGGAATGGAGTAGGTCACTGGGATTGAGCCTGGAAG
GTGTGATGCTCTGGGTAGCATCCCTGAGTCAGGGCAGAGCAAGAAAGCTC
CATCCATCTCACCTGGTGGCAAAAAAGATTCAGGAAATGTGGGTCCCCTC
CACTCTTGTTCTATTT

CCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACAGCTTCAGT
GAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTA
CACAAAGAATAAACAGGCTGAGAAAGAAATAAGGGAAACAACACCCTTTT
CAATAGTCACAAATAACATAAAATATCTTGGTGTGACTCTAACTAAGGAA
GTGAAAGATCTGTATGGTAAAAACTTCAAGTCTTTGAAGAAAGAAATTAA
AGATCTCAGAAGATGGAAAGATCTCCCATGTTCATGGATTGGCAGGATTA
ACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCA
ATCCCCATCTAAATTCCAACTCAATTCTTCAAAGGAATTAGAAAGAGCAA
TCTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTT
CTCAAGGATAAAAGTTCCTCTGGTGGAATCACCATGCCTGACCTAAAGCT
TTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACA
GACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACAC
ACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAACCAGTGGAA
GAATGACAGCATTTTCAAGAAATGGTGCTGGCACAACTGGTTGTTATCAT
GTAGAAGA

Query= MSMg01no333_a06.b1 MSMg01no333_a06.b1 CHROMAT_FILE:
MSMg01no333_a06.b1 PHD_FILE: MSMg01no333_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:05 2005
         (642 letters)



>mm_chr13_71138966_71140007
          Length = 1042

 Score = 1123 bits (581), Expect = 0.0
 Identities = 623/637 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctatagaatttacctgggttggaggatgggaaaatctgagcagtgtcccggacg 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattcctatagaatttacatgggttggaggatgggaaaatctgagcagtgtcccagacg 264

                                                                       
Query: 65  acaaacagagttcagagagacacaggacaggagcagataaagctccatccagatagaaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaaacagagttcagagagacacaggacaggagcagataaagctccatccagatagaaac 324

                                                                       
Query: 125 aaaggtcagagggtgtccacataagccaagaacgatgggcagccagcagaggcagaaagg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaggtcagagggtgtccacataagccaagaacgatgggcagccagcagaggcagaaagg 384

                                                                       
Query: 185 aaccagcctagcgatctttggagtgagcagggacctgccagtgttttgattccagtcttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaccagcctagcgatctttggagtgagcagggacctgccagtgttttgattccagtcttc 444

                                                                       
Query: 245 tttgctccagagccctgaggaaatagcttatactgttggaaactaccaatttcatggcga 304
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgctccatagccctgaggaaatagcttatactgttggaaactaccaatttcatggcga 504

                                                                       
Query: 305 tttgttatggttgtgctatgaagcagcagggtatagcacagcacaagcattcatggatca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttgttatggttgtgctatgaagcagcagggtatagcacagcacaagcattcatggatca 564

                                                                       
Query: 365 aagcaaaactgagccaggcagtctgaagagcagaaatctttcagctgtgatcatggctca 424
           ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 565 aagcaaaactgagccaggcagtctggagagcagaaatctgtcagctgtgatcatggctca 624

                                                                       
Query: 425 gctaacagagaactataaagtgcccaccttgagccacacatagctgcgctaagcacagaa 484
           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 625 gctaacagagaactataaagtgcccaccttgagccacacatggctgtgctaagcacagaa 684

                                                                       
Query: 485 gggaacctgatgacccccgattgcccactggttcacatagccccttgatgccagaacaca 544
           || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtaacccgatgacccccgattgcccactggttcacatagccccttgatgccagaacaca 744

                                                                       
Query: 545 ctcaccacagagcaacctgtctccctggaatggagtaggtcactgggattgagcctggaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 745 ctcaccacagagcaacctgtctccctggaatggagtaggtcactgggattgagactggga 804

                                                
Query: 605 ggtgtgatgctctgggtagcatccctgagtcagggca 641
           ||||| |||||||||||||||||||  ||||||||||
Sbjct: 805 ggtgttatgctctgggtagcatccccaagtcagggca 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)