CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAATCCGCGGA
ATTCATCTCTTATTATCCGTTCCCTGCCTTGTGGTAGCTTGGGCTATCTC
ACAGGTCATACGGATATTAGACTCAGCCACCTACTAGAATATGAGCCAAT
TTTTAAGCTCCATCTTTGTGTCTGGCATATTAATTTTCTTATGCATCTTC
TGTTCTGTTCCTCCTCTCTAATGTGGATGATAATGAGTCCTTAAAGGACT
AAAACTATACTAAGATAAAAAGAGTCCCCTAGGGATGATATAGTTGGACG
ACTCTGGCAATCACATCCACTTAGGACCTCCCACAGTAGCAAGGTGTTAA
CATCCACATGACTGGACTACTGGACAGACTGCAGGTGTCTGTTCATTACT
GCAATGAGCCAAGCCCATGCCACCATCTGTTTAAGAATCATGTATTCTAC
AATGATAACATGAAAGAGTGCTAATTTGAGGGATTAGAAGAAAGGAGGCA
AATGAGAGTACTATGTACTTCATAAAATAATAAATAGATGGCAAGGCTCA
TGCCATCGTGGGATCTTGGTGTTTCTGGCTTAGGTGTTACAGTGTGAAGA
TGACATGACCCTCACGGGATCCTTGATGCACAGATCTTCAGATGACAGTG
TTGTTTGTGGATGTAGTGGGAAATTAATTAGGACGTGGGGTCAATTAGAA
AATACTAGTATACCTTAGNAGGATATATTAATCCTCCTGTTTCTTCTTAC
TTTCTCTACTTCTTGGATAATAT

CAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACAAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCCGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCACACCACCCTTATTTATAATAGCCAG
AAGCTGGAAGGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGGCCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCCCTGATAA
GTGGATATTAGCCCAAAACCTAGGATATCCCAGATATTAGATACCATTTC
CTAAACACATTGAACTCAAGATAAATGAAGACTGAAGTGTGGACACTATG
CCCCTCCTTN

Query= MSMg01no333_i06.b1 MSMg01no333_i06.b1 CHROMAT_FILE:
MSMg01no333_i06.b1 PHD_FILE: MSMg01no333_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:43 2005
         (599 letters)



>mm_chr13_10810374_10811372
          Length = 999

 Score = 1073 bits (555), Expect = 0.0
 Identities = 585/595 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatctcttattatccgttccctgccttgtggtagcttgggctatctcacaggtca 64
           |||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctcttagtatcagttccccgccttgtggtagcttgggctatctcacaggtca 264

                                                                       
Query: 65  tacggatattagactcagccacctactagaatatgagccaatttttaagctccatctttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacggatattagactcagccacctactagaatatgagccaatttttaagctccatctttg 324

                                                                       
Query: 125 tgtctggcatattaattttcttatgcatcttctgttctgttcctcctctctaatgtggat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtctggcatattaattttcttatgcatcttctgttctgttcctcctctctaatgtggat 384

                                                                       
Query: 185 gataatgagtccttaaaggactaaaactatactaagataaaaagagtcccctagggatga 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gataatgagtccttaaagaactaaaactatactaagataaaaagagtcccctagggatga 444

                                                                       
Query: 245 tatagttggacgactctggcaatcacatccacttaggacctcccacagtagcaaggtgtt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatagttggacgactctggcaatcacatccacttaggacctcccacagtagcaaggtgtt 504

                                                                       
Query: 305 aacatccacatgactggactactggacagactgcaggtgtctgttcattactgcaatgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacatccacatgactggactactggacagactgcaggtgtctgttcattactgcaatgag 564

                                                                       
Query: 365 ccaagcccatgccaccatctgtttaagaatcatgtattctacaatgataacatgaaagag 424
           |||||||||||  |  || |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ccaagcccatgggattatttgtttaagaatcatgtcttctacaatgataacatgaaagag 624

                                                                       
Query: 425 tgctaatttgagggattagaagaaaggaggcaaatgagagtactatgtacttcataaaat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgctaatttgagggattagaagaaaggaggcaaatgagagtactatgtacttcataaaat 684

                                                                       
Query: 485 aataaatagatggcaaggctcatgccatcgtgggatcttggtgtttctggcttaggtgtt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aataaatagatggcaaggctcatgccatcgtgggatcttggtgtttctggcttaggtgtt 744

                                                                  
Query: 545 acagtgtgaagatgacatgaccctcacgggatccttgatgcacagatcttcagat 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acagtgtgaagatgacatgaccctcacgggatccttgatgcacagatcttcagat 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)