TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACAACTGTTCCAACAAAAAGCCTACAAATTCTTTGAAACTGGAC
AGTTATCTAGTAAATGATTACTGAGTTAGGAAAGAAATAAAGAAAATAAA
AACTTTCTAGTATTTGATGAAAATGAAGGCACAAAATACCCAAAGTCTGG
GGACACAATGAAAGCAGCTGAGAGGAAAGTTCATAGTATTAAGTGCCTTC
ATAAAGAGATTATAGAGATGATGCTATGCTAGCAAATGAAAAGCACACCT
GAAAGCTCTAGAACAAAAAGAATCTTACACATCCAAGAAGAGCACACAGC
AATAAATAATCAAATGCCATGCTGAAATTAATACATTAGAAACAGGAAGA
GCAATACAATGAAACCAAGAGCTAGTTCTTTGAAAAAAAAATCAACAAGA
TAGACAAACCTCTATCCAACCTAAGTAAAAGGCAGAGAGACAGTATCCAA
ATAAACAAAACCAGAAATGAAAAGGGAGATGTAAAAAAAGAAACTGAGAA
AATTTACAAAATCATTTTGTCTTACTTCAAAAGCCTGTACTCCACAGAAT
TGGAAAATTTTAAATGTAATGGATGGTTTTCTTAATAGATACCACTTACC
AAAGAGTTAAATCAAGATCAGAGAGACNATTTAAATAATCTTATAACTTC
TAAGGAAATAGAAGCAGTCATTAAGAATCTCACAATAACAN

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAGAATTCACATGGATTCTGGAGGAA
AGCTGTTTCTGTTCCAAATGGGGAAATCAAGAACGTATTCTTTACCTCCA
GTTTTTATTTCTCTGTATATGAAAGTATCCCTACTGTACACTCTTAATTC
AGCTCACTGGCAACACAGCTCATTGTATATTTCCAGGTCATGGGGCCAGT
GAAGGATGAATCTTGCATGACTCTCCTGTTATCAAGAAGGGATAGTGAAA
GACTCTGGAACCTGTTGTGTATGGGTACTCTGGTAGGACTGTGGTCAAGG
TACATATAGAAGTCACTCTGGTTTCAGGGGAACAACAACTGTTGAACTTG
GCACTTTGTAGTGAGAAGTCAGAAAAGTTAAACAGTATGAGCAATACGAA
GATATTTACCATATCTCCTTAAAAGAATCCCCACGTGCAGAGATGTGGAT
GCCTCTAAGTATATCCTGTTATCTATGGCAAAACAGACTTAAGAGAAGTT
TTAAGAAATGTTATTAGGTAAATACTAATATTACTATTATTCCTTACATG
GAAAGTAAATGCTGAACTACTTCTATAACTCCTTCCTTGGAAAAAGCAGC
TTGCTTTTTTGCTTTGCCATTTTAAACTTGTACTGGTGACATGAAACTAC
CCAATTTTCCCCAAATCCCCTTGTTTTATTGCTGCTAAGACAAATTTGTG
GGTTGATTT

Query= MSMg01no337_i11.g1 MSMg01no337_i11.g1 CHROMAT_FILE:
MSMg01no337_i11.g1 PHD_FILE: MSMg01no337_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:56 2005
         (481 letters)



>mm_chr13_16988402_16989283
          Length = 882

 Score =  878 bits (454), Expect = 0.0
 Identities = 475/482 (98%), Gaps = 1/482 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagaattcacatggattctggaggaaagctgtttctgttccaaatggggaaatcaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 682 ctagaattcacatggattctggaggaaagctgtttctgttccaaatgtggaaatcaagaa 623

                                                                       
Query: 61  cgtattctttacctccagtttttatttctctgtatatgaaagtatccctactgtacactc 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catattctttacctccagtttttatttctctgtatatgaaagtatccctactgtacactc 563

                                                                       
Query: 121 ttaattcagctcactggcaacacagctcattgtatatttccaggtcatggggccagtgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttaattcagctcactggcaacacagctcattgtatatttccaggtcatggggccagtgaa 503

                                                                       
Query: 181 gg-atgaatcttgcatgactctcctgttatcaagaagggatagtgaaagactctggaacc 239
           || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 502 ggaatgaatcttgcatgactctcctgttatcaagaagggatagtgagagactctggaacc 443

                                                                       
Query: 240 tgttgtgtatgggtactctggtaggactgtggtcaaggtacatatagaagtcactctggt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgttgtgtatgggtactctggtaggactgtggtcaaggtacatatagaagtcactctggt 383

                                                                       
Query: 300 ttcaggggaacaacaactgttgaacttggcactttgtagtgagaagtcagaaaagttaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttcaggggaacaacaactgttgaacttggcactttgtagtgagaagtcagaaaagttaaa 323

                                                                       
Query: 360 cagtatgagcaatacgaagatatttaccatatctccttaaaagaatccccacgtgcagag 419
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 322 cagtatgagcaatacgaagatatttatcatatctccttaaaagaatccccacgtgcagag 263

                                                                       
Query: 420 atgtggatgcctctaagtatatcctgttatctatggcaaaacagacttaagagaagtttt 479
           ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 atgtggatgtctctaagtatatcctgctatctatggcaaaacagacttaagagaagtttt 203

             
Query: 480 aa 481
           ||
Sbjct: 202 aa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space:   410712
Effective search space used:   410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)