MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-338B05
Chromosome	13 (Build37)
Map Location	51,326,021 - 51,326,370
singlet/doublet	singlet
Overlap gene	LOC667733
Upstream gene	LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728
Downstream gene	Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040118 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	Gm906 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380882 MGI:2685752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310081J21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69211 MGI:1916461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC676954 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC667625 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC667632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG667637 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667637 MGI:3644780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Fbxw17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109082 MGI:1923584
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm806 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328250 MGI:2685652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639044 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639044 MGI:3648502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gm904 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380845 MGI:2685750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040315 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	EG667693 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667693 MGI:3704126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein

name	LOC100040161 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040161
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040190 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins pseudo : _no_value

name	EG667712 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667712 MGI:3643286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC676997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG667717 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667717 MGI:3643288
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins pseudo : _no_value

name	Spin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20729 MGI:109242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930519N16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75124 MGI:1922374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667728 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667728 MGI:3646032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 20 Proteins

name	LOC667733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins pseudo : _no_value

name	Ppia-ps13_636.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606521
definition	note : peptidylprolyl isomerase A pseudogene 13_636.1 pseudo : _no_value

name	LOC625524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 Proteins pseudo : _no_value

name	Edg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13610 MGI:1339365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20418 MGI:106179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cks2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66197 MGI:1913447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Secisbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75420 MGI:1922670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sema4d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20354 MGI:109244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gadd45g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23882 MGI:1346325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm906 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802418 GeneID:380882 MGI:2685752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 906, (NCBI) transcript_id : NM_001033438.2

name	2310081J21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395109 GeneID:69211 MGI:1916461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 2310081J21 gene transcript_id : XM_991450.1

name	Fbxw17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723091 GeneID:109082 MGI:1923584
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and WD-40 domain protein 17 transcript_id : NM_175401.3

name	Gm806 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374348 GeneID:328250 MGI:2685652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 806, (NCBI) transcript_id : NM_001033400.2

name	Gm904 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702080 GeneID:380845 MGI:2685750
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 904, (NCBI) transcript_id : NM_001033770.1

name	LOC100040315 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264233 GeneID:100040315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100040315 transcript_id : XM_001474512.1

name	EG667693 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395126 GeneID:667693 MGI:3704126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein product : predicted gene, EG667693 transcript_id : XM_991919.1

name	EG667712 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395132 GeneID:667712 MGI:3643286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG667712 transcript_id : XM_991993.1

name	Spin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802917 GeneID:20729 MGI:109242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spindlin 1 transcript_id : NM_146043.2

name	Spin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709810 GeneID:20729 MGI:109242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spindlin 1 transcript_id : NM_011462.2

name	4930519N16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803151 GeneID:75124 MGI:1922374
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930519N16 gene transcript_id : NM_029173.2

name	Edg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802975 GeneID:13610 MGI:1339365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelial differentiation, sphingolipid G-protein-coupled receptor, 3 transcript_id : NM_010101.3

name	Shc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384043 GeneID:20418 MGI:106179
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : src homology 2 domain-containing transforming protein C3 transcript_id : NM_009167.2

name	Cks2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375774 GeneID:66197 MGI:1913447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC28 protein kinase regulatory subunit 2 transcript_id : NM_025415.2

name	Secisbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812874 GeneID:75420 MGI:1922670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SECIS binding protein 2 transcript_id : NM_029279.1

name	Sema4d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130841 GeneID:20354 MGI:109244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D transcript_id : NM_013660.3

name	Gadd45g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753937 GeneID:23882 MGI:1346325
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest and DNA-damage-inducible 45 gamma transcript_id : NM_011817.1

name	Gm906 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701949 GeneID:380882 MGI:2685752
definition	GO_process : GO:0006520 - amino acid metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC380882 protein_id : NP_001028610.1

name	2310081J21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395110 GeneID:69211 MGI:1916461
definition	codon_start : 1 product : hypothetical protein LOC69211 protein_id : XP_996544.1

name	Fbxw17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723092 GeneID:109082 MGI:1923584
definition	codon_start : 1 product : F-box and WD-40 domain protein 17 protein_id : NP_780610.2

name	Gm806 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701903 CCDS:CCDS26507.1 GeneID:328250 MGI:2685652
definition	codon_start : 1 product : hypothetical protein LOC328250 protein_id : NP_001028572.1

name	Gm904 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702081 GeneID:380845 MGI:2685750
definition	codon_start : 1 product : hypothetical protein LOC380845 protein_id : NP_001028942.1

name	LOC100040315 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264234 GeneID:100040315
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474562.1

name	EG667693 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395127 GeneID:667693 MGI:3704126
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997013.1

name	EG667712 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395133 GeneID:667712 MGI:3643286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997087.1

name	Spin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165378 CCDS:CCDS26510.1 GeneID:20729 MGI:109242
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007143 - female meiosis [Evidence IC]; GO:0007276 - gametogenesis [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; spindlin product : spindlin isoform 2 protein_id : NP_666155.1

name	Spin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755620 GeneID:20729 MGI:109242
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007143 - female meiosis [Evidence IC]; GO:0007276 - gametogenesis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; spindlin product : spindlin isoform 1 protein_id : NP_035592.1

name	4930519N16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165362 CCDS:CCDS26511.1 GeneID:75124 MGI:1922374
definition	codon_start : 1 product : nucleoredoxin protein_id : NP_083449.1

name	Edg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753716 CCDS:CCDS26512.1 GeneID:13610 MGI:1339365
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007193 - G-protein signaling, adenylate cyclase inhibiting pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : endothelial differentiation, sphingolipid G-protein-coupled receptor, 3 protein_id : NP_034231.1

name	Shc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677937 GeneID:20418 MGI:106179
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 exception : mismatches in translation product : src homology 2 domain-containing transforming protein C3 protein_id : NP_033193.1

name	Cks2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384804 GeneID:66197 MGI:1913447
definition	GO_function : GO:0016538 - cyclin-dependent protein kinase regulator activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0007127 - meiosis I [Evidence IMP] codon_start : 1 product : CDC28 protein kinase regulatory subunit 2 protein_id : NP_079691.1

name	Secisbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812875 GeneID:75420 MGI:1922670
definition	codon_start : 1 product : SECIS binding protein 2 protein_id : NP_083555.1

name	Sema4d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49274623 CCDS:CCDS26514.1 GeneID:20354 MGI:109244
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0050772 - positive regulation of axonogenesis [Evidence IGI] [Evidence IDA] codon_start : 1 note : M-sema G; semaphorin H product : semaphorin 4D protein_id : NP_038688.2

name	Gadd45g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753938 CCDS:CCDS26515.1 GeneID:23882 MGI:1346325
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000186 - activation of MAPKK activity [Evidence IDA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0042095 - interferon-gamma biosynthesis [Evidence TAS]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0045063 - T-helper 1 cell differentiation [Evidence TAS] codon_start : 1 exception : mismatches in translation note : growth arrest and DNA-damage-inducible, gamma product : growth arrest and DNA-damage-inducible 45 gamma protein_id : NP_035947.1

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 7 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 6 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 5 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 4 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 3 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 2 pseudo : _no_value

name	LOC676954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676954
definition	number : 1 pseudo : _no_value

name	LOC667632 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667632
definition	number : 1 pseudo : _no_value

name	EG667637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667637
definition	number : 4 pseudo : _no_value

name	EG667637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667637
definition	number : 3 pseudo : _no_value

name	EG667637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667637
definition	number : 2 pseudo : _no_value

name	EG667637 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667637
definition	number : 1 pseudo : _no_value

name	EG639044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639044
definition	number : 1 pseudo : _no_value

name	EG639044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639044
definition	number : 2 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 1 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 2 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 3 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 4 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 5 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 6 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 7 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 8 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 9 pseudo : _no_value

name	LOC100040161 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040161
definition	number : 10 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 6 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 5 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 4 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 3 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 2 pseudo : _no_value

name	LOC676997 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676997
definition	number : 1 pseudo : _no_value

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 1 pseudo : _no_value

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 2 pseudo : _no_value

name	LOC625524 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625524
definition	number : 3 pseudo : _no_value

name	LOC100040118 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264226 GeneID:100040118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : hypothetical protein LOC100040118 pseudo : _no_value transcript_id : XR_031576.1

name	LOC667625 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264227 GeneID:667625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : hypothetical LOC667625 pseudo : _no_value transcript_id : XR_035664.1

name	LOC100040190 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264230 GeneID:100040190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins product : similar to mKIAA1897 protein pseudo : _no_value transcript_id : XR_031664.1

name	EG667717 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94395134 GeneID:667717 MGI:3643288
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins product : predicted gene, EG667717 pseudo : _no_value transcript_id : XR_002063.1

name	EG667728 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264231 GeneID:667728 MGI:3646032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 20 Proteins product : predicted gene, EG667728 transcript_id : XR_035232.1

name	LOC667733 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264232 GeneID:667733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins product : similar to cortactin pseudo : _no_value transcript_id : XR_031720.1

clone name	MSMg01-056M23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145N07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-315F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-530F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526M23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-055E12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-426F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-458A01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-548A11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-109K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-109J15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-175P19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-184P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-338B05.T7 (MSMg01no338_b05.b1)	MSMg01-338B05.TJ (MSMg01no338_b05.g1)
ACC	AG452696	AG452697
length	751	757
length of high quality (start - end)	520 (46 - 565)	557 (66 - 622)
definition	CHROMAT_FILE: MSMg01no338_b05.b1 PHD_FILE: MSMg01no338_b05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:26:38 2005	CHROMAT_FILE: MSMg01no338_b05.g1 PHD_FILE: MSMg01no338_b05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:26:38 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCTCCCATAATCCCTCAGTCTCTACCTGTTACAGGGTACGGCTGGCA TACCCTGCCCCTACCCTGAACTCCCTAGCCTAGGAGTTGGGCTGCCCTTC CCTCAGCTGCCCTTCCAGCCATTTTGGATACCCACCCCTTTGGTCTATCC TTACCCTCCTAGATTCTCAGTCTCCTGATCTCCTGGATCTCTCCTCTCTC CCCCTCCCCCCACTGTCTTCTCACATGGCTCAACTGAGGGTCATGTCCAT TCTGGTCTCTCCCAGAATGCCTCTGACTATGCTCTCCCTCATATCTGCAA TAAACCTCCTCCTCCCCTGTACCTAGGAGCAGTCATGTCCCTTCCTTTTT GTTTCTGTTCTTCATGTACTTACATGTTGGTAGAACAAGTAATTTGCACG TGCATGCTTGTGTATTAGATATGTGTAAGTGTGCAGCCAAGTATACACTA CACGCATGTGTGCTCATGTGCATTTAGTGGCCAGAGTTTGACCGTGGAGG TCTTCCTCTACGCCTGCCTACCTTACATTGTTGAGATGGGCTCTCTCACT GAAACGAGCTAATCAATTTGGCAAGATTAGCTGGGCAGGGTTTCTATCTC AGCCACCCCGAGACATGCAAGCCCACCCTTTTATGTGTGGGAACTGGGGA TTCAGGCTCAGTTTCTCTTGGTTTGGTGGAAAAGCACTTTTCTTGGGCCC A	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXAAAGGCTTAGAGTTTTAGCTGTGCAGTGGTGGCGC TCGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGACAGATTTCTGAGT TCGAGACCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACA CAGAGAAACCCTGTCTCGAAAAACGGGGAAAAAAGAAAAAGAAAAGAAAA GAAAAAAAGACTCAGAGTTTTAACATTAATGGAGTTAATAAACTATTAAT CTAGCCCTGTTAAATCTCGGACTACCCTATAGTCACAAGCACAAAATTTC AAATATCTTGGTTATCATCTAAGTATAAACTTAATGGCTTGTTTCACTGG GCTAGAAAGATGCCTGCCCAGTCTATATATCCAGCTTTCTGGACAGAAAA AAAAAAAAAAGTCATGCTTTTTAACCCACAGCCATAACTTTTGCTGTGAC TTGAAGGTGTGAGCCTACTCCAGCTCATTTACAGATATCTCTTAGCTGCT CTTTCTACGATGTGGATTTCAGTACAGATTACAAACATTGGTAATGATAC TATAACTAAAACTTTTATTGATTGATTTATTTTTTGGAAACTGAAAAATG TATGTCAGCCTCAGAAAGTTCAGGGGGTTCCCACCCCTCCCAACCTGTCT TGTTCCTGGGAGTGGGGTCCCGGGGCTCCTTCCTTCTTCCCCATCCTTCC AGGAGTG
quality values	Open. Hide. 8 8 8 8 8 9 11 11 13 28 28 37 37 32 29 29 41 22 23 19 19 14 14 25 34 23 28 17 17 16 19 19 9 7 7 7 7 10 15 31 25 30 30 30 31 31 59 59 59 23 19 19 21 29 30 59 37 22 22 8 8 8 8 10 23 28 37 37 37 41 41 47 50 57 57 59 59 57 57 57 57 57 47 47 47 47 47 47 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 57 57 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 59 57 68 68 57 57 57 57 68 68 68 54 54 54 54 54 57 54 54 57 59 59 59 59 59 59 59 59 59 59 57 48 43 43 40 37 30 39 39 59 59 57 50 50 50 50 48 46 46 46 41 39 39 39 31 25 25 25 39 39 41 59 59 40 40 40 43 43 48 48 48 48 57 57 57 48 48 43 43 39 43 43 40 39 39 39 39 40 43 40 46 59 39 37 37 24 22 18 18 19 22 28 30 31 25 32 34 34 32 24 24 28 28 28 34 35 31 25 35 37 37 37 34 34 38 39 34 32 23 23 20 27 30 14 14 14 25 19 22 22 26 28 20 20 20 18 15 10 10 10 18 12 14 14 18 15 18 15 15 11 18 18 17 17 11 13 17 23 13 10 8 8 8 15 21 24 22 22 18 21 23 12 8 8 8 8 8 8 10 17 16 10 10 11 11 10 10 10 8 8 9 9 9 11 14 10 13 11 9 9 8 10 10 20 11 11 11 11 11 14 12 9 9 9 7 7 6 6 6 6 8 8 10 10 11 10 8 8 7 8 8 9 9 11 10 10 15 10 8 8 8 8 8 8 8 8 8 9 8 9 11 10 10 16 20 20 19 28 11 9 10 10 8 8 9 11 10 11 10 10 10 10 11 11 11 13 17 14 12 12 12 10 11 10 8 8 8 11 12 13 8 8 8 8 13 10 23 19 15 9 8 8 8 8 8 8 8 7 7	Open. Hide. 8 8 8 8 10 11 16 24 24 34 34 34 37 37 37 30 25 27 28 32 30 23 23 11 9 11 10 9 9 9 9 14 21 34 39 36 32 37 37 37 37 36 36 37 59 59 59 53 57 39 36 23 25 13 15 15 19 25 25 24 37 30 26 28 17 25 31 36 59 47 54 47 59 59 68 68 68 68 68 68 48 48 47 47 47 59 59 48 48 48 57 57 68 68 68 57 57 59 57 57 57 57 57 48 48 57 59 57 57 57 40 46 57 47 47 57 57 57 57 59 59 57 51 51 50 50 50 57 57 57 57 57 57 54 52 57 52 52 52 57 57 50 57 50 52 52 57 57 57 57 52 52 52 57 57 57 57 52 52 57 52 52 57 59 59 52 52 57 57 43 52 57 57 68 68 68 68 57 57 52 57 52 52 57 57 57 52 52 57 52 52 52 57 57 57 57 43 44 35 35 43 43 57 57 57 57 57 43 39 43 62 62 62 57 57 57 57 43 59 59 57 45 52 52 57 57 57 57 57 57 57 57 57 57 44 43 44 43 52 59 59 57 52 52 52 57 57 52 43 43 47 43 35 47 47 59 57 57 57 43 57 57 37 43 57 59 59 68 68 68 68 57 57 57 57 57 57 59 54 54 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 59 59 54 59 59 59 59 54 54 59 59 59 59 68 68 59 59 37 42 42 57 46 57 57 57 57 57 57 57 57 57 59 59 68 68 59 59 57 54 57 59 59 54 54 54 59 57 68 57 54 48 48 43 43 43 57 59 59 59 59 59 59 59 57 57 59 59 47 43 41 47 59 57 59 59 59 59 59 59 48 59 47 47 59 59 59 44 44 41 41 44 59 59 59 59 59 59 48 48 48 48 57 59 57 57 59 59 59 59 59 47 47 47 48 48 50 57 59 57 57 57 54 48 48 48 48 46 46 54 54 54 54 46 47 43 43 43 46 43 59 47 54 54 57 43 57 54 48 57 57 59 59 59 57 57 57 57 57 57 59 59 47 57 43 43 37 43 43 47 47 47 59 59 59 41 29 29 32 37 36 36 36 39 39 47 39 39 39 43 43 48 48 59 59 59 47 40 37 28 28 37 37 48 48 50 57 57 42 42 33 33 24 24 25 43 43 57 57 48 48 48 43 43 36 37 39 43 43 48 48 46 47 37 37 30 19 19 14 14 17 28 32 41 46 34 34 28 32 24 30 24 32 35 39 39 48 48 48 43 40 40 41 30 30 18 18 16 25 23 32 30 30 23 23 23 28 24 22 20 20 26 34 25 27 15 15 13 25 14 14 14 30 27 37 41 41 32 28 24 16 14 14 19 20 21 19 19 19 30 34 25 20 21 10 10 10 17 21 37 37 34 16 13 8 8 8 10 10 12 19 25 19 12 12 16 15 9 9 10 11 11 9 10 10 13 12 9 12 17 12 10 12 12 12 12 13 9 9 9 10 10 10 10 10 10 11 10 10 12 10 10 9 9 9 10 10 13 14 19 9 9 9 9 9 8 8 8 8 10 10 14 10 10 8 8 8 12 10 11 6 7 7 8 8 8 12 15 9 8 8 10 11 7 7 7 8 8 10 11 9 9 9 9 9 13 11 10 10 9 9 8 9 9 9 9 9 10 12 8 8 8 8 13 13 8 8 8 8 8 8 10 10 9 10 6 7 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no338_b05.b1 MSMg01no338_b05.b1 CHROMAT_FILE:
MSMg01no338_b05.b1 PHD_FILE: MSMg01no338_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:38 2005
         (520 letters)



>mm_chr13_51325451_51326370
          Length = 920

 Score =  669 bits (346), Expect = 0.0
 Identities = 349/350 (99%)
 Strand = Plus / Minus

                                                                       
Query: 171 ctcagtctcctgatctcctggatctctcctctctccccctccccccactgtcttctcaca 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ctcagtctcctgatctcctggatctctcctctctccccctccccccactgtcttctcaca 861

                                                                       
Query: 231 tggctcaactgagggtcatgtccattctggtctctcccagaatgcctctgactatgctct 290
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tggctcagctgagggtcatgtccattctggtctctcccagaatgcctctgactatgctct 801

                                                                       
Query: 291 ccctcatatctgcaataaacctcctcctcccctgtacctaggagcagtcatgtcccttcc 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ccctcatatctgcaataaacctcctcctcccctgtacctaggagcagtcatgtcccttcc 741

                                                                       
Query: 351 tttttgtttctgttcttcatgtacttacatgttggtagaacaagtaatttgcacgtgcat 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttttgtttctgttcttcatgtacttacatgttggtagaacaagtaatttgcacgtgcat 681

                                                                       
Query: 411 gcttgtgtattagatatgtgtaagtgtgcagccaagtatacactacacgcatgtgtgctc 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcttgtgtattagatatgtgtaagtgtgcagccaagtatacactacacgcatgtgtgctc 621

                                                             
Query: 471 atgtgcatttagtggccagagtttgaccgtggaggtcttcctctacgcct 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgtgcatttagtggccagagtttgaccgtggaggtcttcctctacgcct 571


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information