Query= MSMg01no339_d22.b1 MSMg01no339_d22.b1 CHROMAT_FILE:
MSMg01no339_d22.b1 PHD_FILE: MSMg01no339_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:02 2005
(529 letters)
>mm_chr13_6977977_6978907
Length = 931
Score = 884 bits (457), Expect = 0.0
Identities = 493/505 (97%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 27 ttcaccaccagagaaaggatacagagacaggctatcgcagcttctactctacaatgccac 86
||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||
Sbjct: 731 ttcaccaccagagaaaggacacagagacaagctatcacagcttctactctacaatgccac 672
Query: 87 aatcaaggacatttaaaaacggaaacacttcctcttactctgcttgacagaaatactaga 146
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 671 aatcaaggacatttaaaaacggaaacacttcctcttactctgcttggcagaaatactagg 612
Query: 147 ctgaaaaagattaatagtaaagcccatgttaagcccatgtgacacacaagtctttacctc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgaaaaagattaatagtaaagcccatgttaagcccatgtgacacacaagtctttacctc 552
Query: 207 ttagatcatgtaactatacagactttccttagcacaaatctccaggtgcctgtgt-a-ta 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 551 ttagatcatgtaactatacagactttccttagcacaaatctccaggtgcctgtgtcacta 492
Query: 265 cacaggtataatatattctctaggctcctgtggatgaagaagccctacgtggatataaaa 324
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 491 cacaggtataatatattctctaggctcctgtggatgaagaagccctacatggatataaaa 432
Query: 325 tcctaggttagtttctcaaatgcctctcttcacctttcaatcagctgaccaactaataac 384
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 431 tcctaggttagtttctcaaatgcctctcttcacctttcaatcagttgaccaactaataac 372
Query: 385 gttatttgatgcattgtctatatgaagacatgatgggagggggagggttctttgacttga 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gttatttgatgcattgtctatatgaagacatgatgggagggggagggttctttgacttga 312
Query: 445 atggaacactcagaactctctcacacccaagcaaagcttatgcgacaatagggtttcctc 504
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atggaacactcaaaactctctcacacccaagcaaagcttatgcgacaatagggtttcctc 252
Query: 505 cgcaatgcatgtctcacacttgtgc 529
| |||||||||||||| ||||||||
Sbjct: 251 cacaatgcatgtctcatacttgtgc 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 931
Length adjustment: 10
Effective length of query: 519
Effective length of database: 921
Effective search space: 477999
Effective search space used: 477999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_d22.g1 MSMg01no339_d22.g1 CHROMAT_FILE:
MSMg01no339_d22.g1 PHD_FILE: MSMg01no339_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:02 2005
(498 letters)
>mm_chr13_6808656_6809553
Length = 898
Score = 659 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 154 atgattgttatttattatcagtgccccgagcatctctaagtctctgtattgatcacaccc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atgattgttatttattatcagtgccccgagcatctctaagtctctgtattgatcacaccc 413
Query: 214 tccccacactcagctattagctactggtgaggtccagggaaaaggaagtcattgtcttat 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tccccacactcagctattagctactggtgaggtccagggaaaaggaagtcattgtcttat 473
Query: 274 gtaatgtatccacaggtgagtccaccaggctcccaagcattgcttgaagtttgcattcat 333
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtagtgtatccacaggtgagtccaccaggctcccaagcattgcttgaagtttgcattcat 533
Query: 334 acaaatgtactgattaaactcagtgggtcacatgacagaacaaaactacatgcataggaa 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acaaatgtactgattaaactcagtgggtcacatgacagaacaaaactacatgcataggaa 593
Query: 394 aaaaagatttgtaagaagcgagggttgatgggcaggagggagagaggccagagaggttgg 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aaaaagatttgtaagaagcgagggttgatgggcaggagggagagaggccagagaggttgg 653
Query: 454 agagagtaaccagaaggctgggcacacaggctattattattgaat 498
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agagagtaaccagaaggctgggcacacaggctattattattgaat 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
