ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTAATCCGCCTTCATGAAAAACAACCATACAAGTTATCCACCAATGT
CCTTCATGAGTGGCTCTATCTCTTGAGATTTTGCTAGAGTCTATAGTTAC
AATAAACAAGCCCATATTTCAGTGGTGTACATAACAAACGCTTTTGTCTA
ATTTCTATGACTTTTTTTTCTACTGGTCATCTTCATATTTTCTGCCAGTT
CCTTCATTCTTGGATTGTCACAGAAGAAGCTGTCTTTCTCCGAGAATGCA
GGCGCAGTACAGAAGAAATCACAGAATGGTTACACCTTATGTACTTTATT
TAAGTTGAGAATTATATGCTATTCTCCTGCTTATATTTCATAGGCAAAAT
AAATCAAAGAGAGAAGCTTAGAACCAACTATAATAAAAATAAAATAAAAT
ATAAATTCTCCCATATGAAGGAAAAGAAGTACCCCAATGAACAAAGCAAC
TCCCTATGATTTCTTTCCCTTTGACACTACTATTCCTAGTTCCTGACTTG
TAAAATGATAGTGTCACACTGACAGGCCACGCTGGCATGTGGTGAATTTT
CAGATGCCTATTGTATATTTTCTTGAATACCAGTTACCATGTCAGTTTGT
CTCAAGTACCTTCTTATCATAATCTTCTTTGGTGCATCAAGGAACAGGCC
ATGAAATTTCCAATGTTCTAAAACCTCTN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGTTTAAATCTGAACCCCA
TTTTTAAGTTGGGTTATTTAGTTTGTTGATGCCTGGTTTCTCGATTCCTT
TATATATTTTGAATACCAACCCTCTGTCAGATGTGGGGTTGGTGAAGATT
TTTTTTCCCATTCTGTAGGCTGTGGGGCTGTTGTTCCTGGATGGGGTAGG
GGTTGGGGATGGGAAATGAGGGATCAGGTTGGNGNANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTTNNTNNTTTNTTTNTNTTTTNTTTTTTTT
NTTTTTTTTTNTTTTTTTTTTTTTNTTTTTNNTTTTNTTNTTTTTTTTTN
TNNTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTT

Query= MSMg01no340_a05.b1 MSMg01no340_a05.b1 CHROMAT_FILE:
MSMg01no340_a05.b1 PHD_FILE: MSMg01no340_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:58 2005
         (586 letters)



>mm_chr13_119470097_119471082
          Length = 986

 Score = 1127 bits (583), Expect = 0.0
 Identities = 583/583 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttaatccgccttcatgaaaaacaaccatacaagttatccaccaatgtccttca 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaatccgccttcatgaaaaacaaccatacaagttatccaccaatgtccttca 263

                                                                       
Query: 64  tgagtggctctatctcttgagattttgctagagtctatagttacaataaacaagcccata 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgagtggctctatctcttgagattttgctagagtctatagttacaataaacaagcccata 323

                                                                       
Query: 124 tttcagtggtgtacataacaaacgcttttgtctaatttctatgacttttttttctactgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttcagtggtgtacataacaaacgcttttgtctaatttctatgacttttttttctactgg 383

                                                                       
Query: 184 tcatcttcatattttctgccagttccttcattcttggattgtcacagaagaagctgtctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcatcttcatattttctgccagttccttcattcttggattgtcacagaagaagctgtctt 443

                                                                       
Query: 244 tctccgagaatgcaggcgcagtacagaagaaatcacagaatggttacaccttatgtactt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctccgagaatgcaggcgcagtacagaagaaatcacagaatggttacaccttatgtactt 503

                                                                       
Query: 304 tatttaagttgagaattatatgctattctcctgcttatatttcataggcaaaataaatca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatttaagttgagaattatatgctattctcctgcttatatttcataggcaaaataaatca 563

                                                                       
Query: 364 aagagagaagcttagaaccaactataataaaaataaaataaaatataaattctcccatat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagagagaagcttagaaccaactataataaaaataaaataaaatataaattctcccatat 623

                                                                       
Query: 424 gaaggaaaagaagtaccccaatgaacaaagcaactccctatgatttctttccctttgaca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaaggaaaagaagtaccccaatgaacaaagcaactccctatgatttctttccctttgaca 683

                                                                       
Query: 484 ctactattcctagttcctgacttgtaaaatgatagtgtcacactgacaggccacgctggc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctactattcctagttcctgacttgtaaaatgatagtgtcacactgacaggccacgctggc 743

                                                      
Query: 544 atgtggtgaattttcagatgcctattgtatattttcttgaata 586
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atgtggtgaattttcagatgcctattgtatattttcttgaata 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)