NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACAGATAATTCTCTAATGACTGAGAAACACTTGCAAAAAAC
AAAACAAAACAAAACAAACAAACAAACAAAACAAAACAAAACAAAACAAA
ACAAAACAAAACAAAACAAAACAAAAAACCTTCTTAGTCGCCAGGGAAAT
ACAAATCAAAATAACTCTGAGATTCAATCTTATATCCTTCAGAATAGCTA
AGATTAAAAATTCAAGTGACAGATCATGCTAGAGAAGATGTGGAGCAAGG
ACAATGCTCCTCTATTGCTGGTGGAAGTACAAACTTCCACAACCACTTTG
GAAATCAATTTGGTGATTTCATAGAAAATTGGGAATAGACCCAGCTATAC
ATATACCCAAAAGATGCTCCACCATATCACAAGGACACTTTTTCAATTAA
GTTTATAGCAGCCTAATTCATAATAGGCAGAAACTGGAAACAATAGAAAT
ATCCCTCAACCAAAGAATGGACAAAGAAAACATGATTCATTTATACAACA
AAATACTACTCAGATATACTTTTTAAAAGAACATCATGAAATCTGCAGGC
AAATGGATGGAACTAGAAAATACCATCCTGAGTGAGGTAACCTAGATTCA
AAAGGAAATATATATAGTTATAAATGGATATTATCCATAAAGAATAGGAT
ACTCATGCTAAAATCTACATACTNCAGTAAACTAGGTAATAAGGAGGACG

NCCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTGGCTAACCCTCAAGCCACCTTT
TTTTCTAAGTATTTCTTTTTTGAGATAAGATTTCATAGAGCTCACGGCTC
TATGTAGCCGAAGGTGACCTTGAACTCTTGATCTTTTTGAGCTCAGGCTG
GCCTTGCATCTACTATGTAGCTGGAGATGGCCTTGAATTCTTGATCTTCC
AGCCTCTAACTCCTGTGTGATAGGCTATAGGCCTGTGCAACTGTACTCAT
CCCCAGCTTTGTTTCTGAATTTCTGCTGGAGCTGCTCACATATTCCTGGA
AGCTGGCACCTGACTGAGAAGCCTAAACTTGCTGGATTGAGCATCAGTGT
GCAGTAGAAAGTGGATAAAGAGAAAATTATAGATTAAATAACCACACCCA
TGTGGTACGTGGGTTGTACAGTTTTGCATTCTTTCCTTTCCATCCTTTCA
CCATGAGTAGAGAAGTAAAATTTAACCCATATGCCATTTTAAAGTCACCT
TCTAGTAAGTCATAATCAGACGAGAACTTGAACATGACGTTAGAAGCAGA
AACCAACTTGCTGAGAAATCATCCGGGCTTCCCCCAACAGTCATTTGAGT
GGGTTTTTAGAAAAGTAGAAAATTTCCAATTCTAGACAGACTCTGGTTTT
CAAATCTTTCCCATAGTCCTTCAAATATTGAGTCTTAGGTCCA

Query= MSMg01no340_g18.g1 MSMg01no340_g18.g1 CHROMAT_FILE:
MSMg01no340_g18.g1 PHD_FILE: MSMg01no340_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:26 2005
         (580 letters)



>mm_chr13_111759948_111760929
          Length = 982

 Score = 1052 bits (544), Expect = 0.0
 Identities = 560/566 (98%), Gaps = 2/566 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  gccacctttttttctaagtatttcttttttgagataagatttcatagagctcacggctct 76
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 982 gccacctttttttctaagtatttcttttttgagacaagatttcatagagctcacagctct 923

                                                                       
Query: 77  atgtagccgaaggtgaccttgaactcttgatctttttgagctcaggctggccttgcatct 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 atgtagccgaaggtgaccttgaactcttgatctttttgagctcaggctggccttgcatct 863

                                                                       
Query: 137 actatgtagctggagatggccttgaattcttgatcttccagcctctaactcctgtgtgat 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 actatgtagctggagatggccttgaattcttgatcttccagcctctaactcctgtgtgat 803

                                                                       
Query: 197 aggctataggcctgtgcaactgtactcatccccagctttgtttctgaatttctgctggag 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aggctataggcctgtgcaactgtactcatccccagctttgtttctgaatttctgctggag 743

                                                                       
Query: 257 ctgctcacatattcctggaagctggcacctgactgagaagcctaaacttgctggattgag 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctgctcacatattcctggaagctggcacctgactgagaagcctaaacttgctggattgag 683

                                                                       
Query: 317 catcagtgtgcagtagaaagtggataaagag--aaaattatagattaaataaccacaccc 374
           ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 682 catgagtgtgcagtagaaagtggataaagagaaaaaattatagattaaataaccacaccc 623

                                                                       
Query: 375 atgtggtacgtgggttgtacagttttgcattctttcctttccatcctttcaccatgagta 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atgtggtacgtgggttgtacagttttgcattctttcctttccatcctttcaccatgagta 563

                                                                       
Query: 435 gagaagtaaaatttaacccatatgccattttaaagtcaccttctagtaagtcataatcag 494
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gagaagtacaatttaacccatatgccattttaaagtcaccttctagtaagtcataatcag 503

                                                                       
Query: 495 acgagaacttgaacatgacgttagaagcagaaaccaacttgctgagaaatcatccgggct 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 acgagaacttgaacatgacgttagaagcagaaaccaacttgctgagaaatcatccgggct 443

                                     
Query: 555 tcccccaacagtcatttgagtgggtt 580
           ||||||||||||||||||||||||||
Sbjct: 442 tcccccaacagtcatttgagtgggtt 417


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 982
Length adjustment: 10
Effective length of query: 570
Effective length of database: 972
Effective search space:   554040
Effective search space used:   554040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)