Query= MSMg01no341_a07.b1 MSMg01no341_a07.b1 CHROMAT_FILE:
MSMg01no341_a07.b1 PHD_FILE: MSMg01no341_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:09 2005
(438 letters)
>mm_chr13_47568552_47569389
Length = 838
Score = 723 bits (374), Expect = 0.0
Identities = 419/436 (96%), Gaps = 7/436 (1%)
Strand = Plus / Plus
Query: 5 gaattctttggccttagacttaatatctctaagtctcagttccctcatcagacatcgact 64
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 205 gaattctttggccttagacttaatatctgtaagtctcagttccctcatcaaacatcgact 264
Query: 65 catacactatagaaagggtgtgagggctacattctctgtgaatgctagcctggttctgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtacactatagaaagggtgtgagggctacattctctgtgaatgctagcctggttctgag 324
Query: 125 cttttcttcagttggaatgttttcaatcttagacaatagaagccactaaacaaacaaaca 184
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 325 cttttcttcagttggaatgttttcaatcttagacaatagaaaccact----aaacaaaca 380
Query: 185 aacaaaaataaaaccaacaaacaaaagaatcttcacccttctctctggcttcaccactca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaaaaataaaaccaacaaacaaaagaatcttcacccttctctctggcttcaccactca 440
Query: 245 gtc-gcagctggcatcaataggggcttaatgggagcttgttgaggtaaataaagctgccc 303
||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 gtctgcggctggcatcaataggggcttaatgggaacttgttgaggtaaataaagctgcct 500
Query: 304 gtcatattcacgagaactgatgacatgagtcagatggactccagtttatttcatggcctc 363
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcatattcatgagaactgatgacatgagtcagatggactccagtttatttcatggcctc 560
Query: 364 tgaagctttcgttctctgcactgtcttttctgctttgccttatgtgtggnt-gagggagt 422
|||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 561 tgaagctttcgttctctgcactgtctcttctgctttgccttatgtgtgg-tcgagggagt 619
Query: 423 aattgttgatatttca 438
||||||||||||||||
Sbjct: 620 aattgttgatatttca 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_a07.g1 MSMg01no341_a07.g1 CHROMAT_FILE:
MSMg01no341_a07.g1 PHD_FILE: MSMg01no341_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:09 2005
(372 letters)
>mm_chr13_47651236_47652007
Length = 772
Score = 712 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Minus
Query: 1 tctttctggattgcagtagggttttgcctcttttgagaataactgtcatggaggaattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tctttctggattgcagtagggttttgcctcttttgagaataactgtcatggaggaattgc 513
Query: 61 tgacagtgaagaagccctcatctaaagacatgtcacatctgatcctacacagggagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgacagtgaagaagccctcatctaaagacatgtcacatctgatcctacacagggagcagg 453
Query: 121 ctcacctgtggaagctctatgtcttcagctaaataaaccagttttctttatcaaccatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctcacctgtggaagctctatgtcttcagctaaataaaccagttttctttatcaaccatgt 393
Query: 181 gtggggtggtctgttgttttcctttcgtagaataaactgcttaccttgtgatgtgagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtggggtggtctgttgttttcctttcgtagaataaactgcttaccttgtgatgtgagtta 333
Query: 241 aactaaagatcacgttactgaaaaagcaagttaaaaggttcccggtgttatgagatggca 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 332 aactaaagatcacgttactgaaaaagcaagttaaaaggttcccggtgttctgagatggca 273
Query: 301 ggtatgagacaagaagagtgtccgtcttggtgagtgttgtgaaactgactgaatggtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggtatgagacaagaagagtgtccgtcttggtgagtgttgtgaaactgactgaatggtgtc 213
Query: 361 attgggggattg 372
||||||||||||
Sbjct: 212 attgggggattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
