Query= MSMg01no345_a24.b1 MSMg01no345_a24.b1 CHROMAT_FILE:
MSMg01no345_a24.b1 PHD_FILE: MSMg01no345_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:26 2005
(417 letters)
>mm_chr13_111271163_111271979
Length = 817
Score = 733 bits (379), Expect = 0.0
Identities = 403/411 (98%), Gaps = 4/411 (0%)
Strand = Plus / Minus
Query: 5 gaattcagatccctca-tcaaatttatcttatactggagacatcatctcataattaaaac 63
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaattcagatcccttagt-aaatttatcttatactggagacatcatctcataattaaaac 555
Query: 64 agacaaggatgttcttgagagaggcagcacagccagtcaggaagcattgggactattaaa 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agagaaggatgttcttgagagaggcagcacagccagtcaggaagcattgggactattaaa 495
Query: 124 aatctgatgttgctgagcacagagtctcacttcattctccagtgtccagtacaattatct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatctgatgttgctgagcacagagtctcacttcattctccagtgtccagtacaattatct 435
Query: 184 atgtatgtctcaccctttg-aaaaaataattcatttctaagactctatctcaaacaggca 242
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atgtatgtctcaccctttgaaaaaaataattcatttctaagactctatctcaaacaggca 375
Query: 243 aaattatcaaatgttagattcacatgatatgtggaccactgtaatattttcagtcaaagg 302
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 374 aaattatcaaatgttagattcacatgatatgtggagcactgtaatattttcagtcaaagg 315
Query: 303 caggaagcaagtgatatgcccattagtgatgactagagtacaatgaaggggtagaaagca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caggaagcaagtgatatgcccattagtgatgactagagtacaatgaaggggtagaaagca 255
Query: 363 tgtggtaaacatagggaagaaagaaggaaggggggcagaagggagagggaa 413
||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 254 tgtggtaaacatagggaagaaagaagg-aggggggcagaaggaagagggaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_a24.g1 MSMg01no345_a24.g1 CHROMAT_FILE:
MSMg01no345_a24.g1 PHD_FILE: MSMg01no345_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:26 2005
(421 letters)
>mm_chr13_111257454_111258273
Length = 820
Score = 706 bits (365), Expect = 0.0
Identities = 407/421 (96%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 1 tctgagttttctcattgtgttaaaacactaaagttttaagcattgtcagcattttgaata 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 201 tctgagttttctcattgtgttaaaacactaaagttttaagcattgtcagcgttttgaaca 260
Query: 61 gatttacctttctacatttagtactttaaagaggctcttcagttttcttatccttgacac 120
|||||||||| || ||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 261 gatttaccttcctgcatttagtattttaaagaagctcttcagttttcttttccttgacac 320
Query: 121 ttggttggattaaggacatcaattcaaaatgggtttctatttcttaaattaggaaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggttggattaaggacatcaattcaaaatgggtttctatttcttaaattaggaaggtaa 380
Query: 181 tataggaattgggaaagaccgaaggggagatgactgagatgctggagaggctgggatcct 240
||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 381 tatgggaattgtgaaagaccgaaggggagatggttgagacgctggagaggctgggatcct 440
Query: 241 acagagttctttctgcatctctccctacgcctcattctgtctcaagggggttttggtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagagttctttctgcatctctccctacgcctcattctgtctcaagggggttttggtgga 500
Query: 301 agagttatttaacattcatcgaatttagacatcaaatcttaatgagcatggcacaacatg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagttatt-aacattcatcgaatttagacatcaaatcttaatgagcatggcacaacatg 559
Query: 361 atcattaattttataacatcgttttttattagactcccagatgcattggattttaagtag 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcattaattttataacatcattttttattagactcccagatgcattggattttaagtag 619
Query: 421 a 421
|
Sbjct: 620 a 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
