Query= MSMg01no346_f09.b1 MSMg01no346_f09.b1 CHROMAT_FILE:
MSMg01no346_f09.b1 PHD_FILE: MSMg01no346_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:00 2005
(544 letters)
>mm_chr13_88852302_88853245
Length = 944
Score = 731 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Minus
Query: 167 tattacatccttctgttttacttaggtgagaaattatatattttgaactcatgttttcat 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 tattacatccttctgttttacttaggtgagaaattatatattttgaactcatgttttcat 885
Query: 227 agttcttccccacagccttaagggctgtcctaaatgtcacagaattctaccattttgcta 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 agttcttccccacagccttaagggctgtcctaaatgtcacagaattctaccattttgcta 825
Query: 287 ggcattagacatactttgacatcctggactcatgctgtctctgattatctgattattaac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ggcattagacatactttgacatcctggactcatgctgtctctgattatctgattattaac 765
Query: 347 cttggcagagaagacatttcaccttctcagggataatattttccaaaacagacataaagc 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cttggcagagaagacatttcaccttctcagggataatattttccaaaacagacataaagc 705
Query: 407 gtggtacatataggcaaggagagtatgaaataaccgatctccagatgctctgattttctg 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtggtacatataggcaaggagagtatgaaataaccgatctccagatgctctgattttctg 645
Query: 467 tggtaaacaggctatggcttagatcaacttcactcatacccaactgctaccattttgagg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tggtaaacaggctatggcttagatcaacttcactcatacccaactgctaccattttgagg 585
Query: 527 gatgcctttgggaaacat 544
||||||||||||||||||
Sbjct: 584 gatgcctttgggaaacat 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_f09.g1 MSMg01no346_f09.g1 CHROMAT_FILE:
MSMg01no346_f09.g1 PHD_FILE: MSMg01no346_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:00 2005
(468 letters)
>mm_chr13_88697506_88698375
Length = 870
Score = 851 bits (440), Expect = 0.0
Identities = 462/470 (98%), Gaps = 2/470 (0%)
Strand = Plus / Plus
Query: 1 acccaagaaaagtagactgcgggaaataatcaaactcagggctgaaatcaaccaaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccaagaaaagtagactgcgggaaataatcaaactcagggctgaaatcaaccaaatgga 260
Query: 61 aaaaatagaactatacaaagaatcaaccaaaccaggagctggttctttgagaaaatcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatagaactatacaaagaatcaaccaaaccaggagctggttctttgagaaaatcaac 320
Query: 121 aagatagataaacccctagccagactaactagagggcacagggacagtgtcctaatttac 180
|||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||
Sbjct: 321 aagatagataaacccctagctagactagccagagggcacagggacagtatcctaatttac 380
Query: 181 aaaataaaaactgaagccatttattaaatatgccacatatgacaatattgcaaatgttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaataaaaactgaagccatttattaaatatgccacatatgacaatattgcaaatgttga 440
Query: 241 tgtaattaatttgatgccatgagaaatgacatctatcaactgaagtttttgtcatctgcc 300
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tgtaattaatttgatgccgtgagaaatgacagctatcaactgaagtttttgtcatctgcc 500
Query: 301 atacagtgaaaatgtttctcaggttaggacacctgaatcataggctaagcatccttgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacagtgaaaatgtttctcaggttaggacacctgaatcataggctaagcatccttgagc 560
Query: 361 taa--agactactaagacatcatttgagcattatttgttatagttttaaatttattctct 418
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagaagactactaagacatcatttgagcattatttgttatagttttaaatttattctct 620
Query: 419 gttttgtaacaatatcattttgcaaataaagcagtcagtataaagttcat 468
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttttgtaacaatatcattttgcaaataaagcagtcagtataaagttcat 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 870
Length adjustment: 10
Effective length of query: 458
Effective length of database: 860
Effective search space: 393880
Effective search space used: 393880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
