Query= MSMg01no346_f17.b1 MSMg01no346_f17.b1 CHROMAT_FILE:
MSMg01no346_f17.b1 PHD_FILE: MSMg01no346_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:02 2005
(524 letters)
>mm_chr13_49249422_49250345
Length = 924
Score = 990 bits (512), Expect = 0.0
Identities = 521/524 (99%)
Strand = Plus / Minus
Query: 1 gtagtatcactcgaatctctgcaaggcaggtacctccatcctcatgttcattagtgagaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gtagtatcactcgaatctcttcaaggcaggtacctccatcctcatgttcattagtgagaa 846
Query: 61 aacagacgttgagagaagttaatgaatatatccaaagtcacagccgatgggaggtgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aacagacgttgagagaagttaatgaatatatccaaagtcacagccgatgggaggtgctag 786
Query: 121 gacttgaatctgatccaggactctttgctccggtcttccgtgcattcgctcagaccatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gacttgaatctgatccaggactctttgctccggtcttccgtgcattcgctcagaccatgc 726
Query: 181 tcgctgtggagcattcttcttcatctcacatctggtgagagatcaaggccttcttttctg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 725 tcgctgtggagcattcttcttcatctcacatctggtgagagatcaagtccttcttttctg 666
Query: 241 aagacacaggctaaggctgctttggcccaagtgtgaaaagccacagtgactggaagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagacacaggctaaggctgctttggcccaagtgtgaaaagccacagtgactggaagcttt 606
Query: 301 tgtgaacagcacactgttgtaacccctcagcttctctctcagtatctctagctatcgcaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 605 tgtgaacagcacactgttgtaacccctcagcttctctctcagtatctctagctaccgcaa 546
Query: 361 aactccacagtgtttctgtggtttgggcatatttgattgtataggaatagcgtagtttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aactccacagtgtttctgtggtttgggcatatttgattgtataggaatagcgtagtttgc 486
Query: 421 ttaacccaattgctggcatcctggcgatttctagtgcttattataaataatcctcctgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaacccaattgctggcatcctggcgatttctagtgcttattataaataatcctcctgtg 426
Query: 481 aataccttcatacatcactggtcactccactggaacaggttctg 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aataccttcatacatcactggtcactccactggaacaggttctg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_f17.g1 MSMg01no346_f17.g1 CHROMAT_FILE:
MSMg01no346_f17.g1 PHD_FILE: MSMg01no346_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:02 2005
(242 letters)
>mm_chr13_49065378_49066021
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 232/234 (99%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 1 tcacccttttaattccagaactcaggatgcagaggcaggtggacctgggtgaattgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacccttttaattccagaactcaggatgcagaggcaggtggacctgggtgaattgaagg 260
Query: 61 acaatcttctgtacctaatgagttccaggtcaccagtgctacacagagagacagagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaatcttctgtacctaatgagttccaggtcaccagtgctacacagagagacagagagac 320
Query: 121 cctgtctccccgactgcctccaaaaaaaaaaa--ggattatgactactagattaatagag 178
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cctgtctccccgactgcctccaaaaaaaaaaaaaggattatgactactagattaatagag 380
Query: 179 agagccagccagccacagagcacagaacttaagcaggcgggggcgggggggggg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagccagccagccacagagcacagaacttaagcaggcgggggcgggggggggg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 644
Length adjustment: 9
Effective length of query: 233
Effective length of database: 635
Effective search space: 147955
Effective search space used: 147955
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
