XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTGAGA
ATGCACTTAGCCTGGGGTCAATCCCTAATACTTCCACAAAAAAATTACAA
TAGTTTAAAAGTAGTATAGTGTTAATATATAAAAATAGGATATATAAAAA
AAGAAATCGGGCCAGGCATACAATTCAGTGATATACCACTTGCTTAGCAC
GCACATTAGACCCTGAGTTCAATCAATAACACTAAAAACAAAAGGGAAGA
GGCCTGGGGAGGTGGATCAAAGTAATTGCCACTCTTCAAAACCCTGAGTC
CTGAAGTCGTTTGCAGCAGCACGCATCTGCAATCCCAACACTCTTGCAGT
GTGATGGGAGGTGGAGGCAGATGGGAGAGCCCCTGCAAGCCCTAGGCCAG
CTCAAAGAAACTGAAAGAGACATCTCAAACAGATGGCAGGAAAGAATAGA
CTGTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAAGCTGGAGTTATC
ACAGAGAAAGGAGCTTCCCTTGAAGAAATGCCTCCATGAGATCTAGCTAT
AAGGCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTATGGGTGG
GACCATCTCTGGGCTGGTAGCCTTGGTTCTGTAAGAGAGCAGGCTGAGCA
TGCCAGGGGAAGCAATCCAATAAGCACCATCCCTCCATGGCCTCTGCATC
CCTGCTTGAGTCCAGTCCTGACTCCCTTGGTGAAGAACAGCAATGGGCAA
GTGTAACCTGG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTACCTCAATTAAGCAGAAAACAATGAAA
AGAAAACCATTATCCCAATCCATTAATTTGGGATGGATGATTTTAGTTAT
TTTATGAATTATAGATGTTGTCATTTTAAGAGATAATTTACAAATAATTA
TAGTATTGGACAGGGTGGAAATTAAATAGAGAGCTTAGACTCAGAGATTT
CTATCTTTCCTTTTATCTTCTCTATCCTTCTTTCTTAGGTAAAGGGATGG
AAGTTGAAAATAAAAATTGGGATATAGTAATATCCCACAAATAGAGATGG
CTTGTTAAATCTACTCTGAAACAAAAGCATTTTATAGCCACAAACTTACA
TTGATAGAGATCTTTATATTTTGACTCAGAGTTGGGTTTATTTTTCTTAC
ATTGGTACAGGTTTAAGGTTTTCATTGGTATAAATCTTTGTATATTGATA
CATTTTTTTAAATTAATTTTGTTACTTTTAGGTGGGCATTGTGCCTATGC
AACTCACTTAGGAATGCAAGGCTTCATCCAAGTTATTTTAGTAGCTATTA
CAAAATCTTTAGGATAATTAATACAAGTTAAAAGTCAGGGAGTCCAACTC
ATGGCCGTATTAGATCTAACTTCGTTAATTACAATAAGATTTTTCCGGGT
GATTCCCAAAGTAATAGCTTAAATAATCAAGGTTGACATTTCCGTTAACT
AAAATGTCTTCCAAAGTGGCGGGACCCCCCACGG

Query= MSMg01no349_i22.b1 MSMg01no349_i22.b1 CHROMAT_FILE:
MSMg01no349_i22.b1 PHD_FILE: MSMg01no349_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:12 2005
         (583 letters)



>mm_chr13_53346166_53347148
          Length = 983

 Score = 1112 bits (575), Expect = 0.0
 Identities = 578/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtgagaatgcacttagcctggggtcaatccctaatacttccacaaaaaaatta 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgagaaagcacttagcctggggtcaatccctaatacttccacaaaaaaatta 264

                                                                       
Query: 65  caatagtttaaaagtagtatagtgttaatatataaaaataggatatataaaaaaagaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caatagtttaaaagtagtatagtgttaatatataaaaataggatatataaaaaaagaaat 324

                                                                       
Query: 125 cgggccaggcatacaattcagtgatataccacttgcttagcacgcacattagaccctgag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgggccaggcatacaattcagtgatataccacttgcttagcacgcacattagaccctgag 384

                                                                       
Query: 185 ttcaatcaataacactaaaaacaaaagggaagaggcctggggaggtggatcaaagtaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaatcaataacactaaaaacaaaagggaagaggcctggggaggtggatcaaagtaatt 444

                                                                       
Query: 245 gccactcttcaaaaccctgagtcctgaagtcgtttgcagcagcacgcatctgcaatccca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccactcttcaaaaccctgagtcctgaagtcgtttgcagcagcacgcatctgcaatccca 504

                                                                       
Query: 305 acactcttgcagtgtgatgggaggtggaggcagatgggagagcccctgcaagccctaggc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acactcttgcagtgtgatgggaggtggaggcagatgggagagcccctgcaagccctaggc 564

                                                                       
Query: 365 cagctcaaagaaactgaaagagacatctcaaacagatggcaggaaagaatagactgtgta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagctcaaagaaactgaaagagacatctcaaacagatggcaggaaagaatagactgtgta 624

                                                                       
Query: 425 ctggctggttttgtgtgtcaacttgacacaagctggagttatcacagagaaaggagcttc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctggctggttttgtgtgtcaacttgacacaagctggagttatcacagagaaaggagcttc 684

                                                                       
Query: 485 ccttgaagaaatgcctccatgagatctagctataaggcattttctcaattagtgatcaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccttgaagaaatgcctccatgagatctagctataaggcattttctcaattagtgatcaag 744

                                                  
Query: 545 ggggaaaggccccttatgggtgggaccatctctgggctg 583
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggggaaaggccccttatgggtgggaccatctctgggctg 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)