Query= MSMg01no351_m02.b1 MSMg01no351_m02.b1 CHROMAT_FILE:
MSMg01no351_m02.b1 PHD_FILE: MSMg01no351_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:05 2005
(489 letters)
>mm_chr13_45946783_45947671
Length = 889
Score = 849 bits (439), Expect = 0.0
Identities = 474/486 (97%)
Strand = Plus / Plus
Query: 4 ggaattcttagactgtacctcaggccaaggttgtcactcaggggaccaagaacaccaata 63
|||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatttttagactgtaactcgggccaaggttgtcactcaggggaccaagaacaccaata 263
Query: 64 aacagaaggaccaaagtctacattctacagccaggatggtcgctatatttcacaaccaca 123
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 264 aacagaatgaccaaagtctacattctacggccaggatggtcgctatatttcacaacaaca 323
Query: 124 tattatagattttagaggaaaatggaagggagaaccaaaaggttgtcaacatgagaacag 183
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 324 tattataaattttagaggaaaatggaagggagaaccaaaaggttgccaacatgagaacag 383
Query: 184 accgaaagttatgaagaaaattctaactaccctgatcataaatcacacactgtatacttc 243
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 accaaaagttatgaagaaaattctaactaccctgatcacaaatcacacactgtatacttc 443
Query: 244 tttcaactgaccacactgtaccccacgtttacaagttacacaggaagcacttgttgaatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcaactgaccacactgtaccccacgtttacaagttacacaggaagcacttgttgaatg 503
Query: 304 cggtctggaaactactgatgatagctctctaccttgcctgctccagtgctgcttacagta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cggtctggaaactactgatgatagctctctaccttgcctgctccagtgctgcttacagta 563
Query: 364 ttgtattagggtatcaccagataagtagacctcctctgtacgactcattaatcccttatg 423
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 564 ttgtattagggtatcaccagataagtagacctcctctgtatgactcattaatcccttatg 623
Query: 424 agtttggctaanataggacctacagaccacacacattatttattgtttgtgtgtagagtt 483
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtttggctaaaataggacctacagaccacacacattatttattgtttgtgtgtagagtt 683
Query: 484 gggtgg 489
||||||
Sbjct: 684 gggtgg 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_m02.g1 MSMg01no351_m02.g1 CHROMAT_FILE:
MSMg01no351_m02.g1 PHD_FILE: MSMg01no351_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:05 2005
(337 letters)
>mm_chr13_46121337_46122074
Length = 738
Score = 584 bits (302), Expect = e-171
Identities = 329/342 (96%), Gaps = 9/342 (2%)
Strand = Plus / Minus
Query: 1 tcctgggaatggtgtggaactcagcccccaaaagggtcccatcccaagccaagcatggat 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 508 tcctgggaatggtgtggaactcagccccaaaaagggtcccatcccaagccaagcatggat 449
Query: 61 gaagtgctgtctcttctcatcctcactgagtcccaaagccctccccaccctcagtggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaagtgctgtctcttctcatcctcactgagtcccaaagccctccccaccctcagtggctc 389
Query: 121 agcattgctggagacatcagatgcatctgggtctcaga-gcactttaattacagggagac 179
||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 agcattggtggagatatcagatgcatctgggtctcagaagcactttaattacagggagac 329
Query: 180 ctagagagccaagtgatacagctccatccctgcatcatcagatccaacctccaggatttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctagagagccaagtgatacagctccatccctgcatcatcagatccaacctccaggatttt 269
Query: 240 cttagtgcta----tttttaggcccagcagatgctaccagcactgcctggtcacttcctc 295
|||||||||| | ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 268 cttagtgctaaaaat----aggcccagcagatgctacccgcactgcctggtcacttcctc 213
Query: 296 ggtggatttcctctctccctctccctctccctctccctctcc 337
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggtggatttcctctctccctctccctctccctctccctctcc 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
