Query= MSMg01no352_j07.b1 MSMg01no352_j07.b1 CHROMAT_FILE:
MSMg01no352_j07.b1 PHD_FILE: MSMg01no352_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:11 2005
(465 letters)
>mm_chr13_21264495_21265359
Length = 865
Score = 777 bits (402), Expect = 0.0
Identities = 440/462 (95%), Gaps = 19/462 (4%)
Strand = Plus / Minus
Query: 5 gaattccgtcgtactctggaagggccaggaaccgaggcgataaacgccgaattccagata 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattccgtcgcactctggaagggccaggaaccgaggcgataaacgccgaattccagata 508
Query: 65 ggaattggagaaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaccaac 124
|| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 507 gg-attggagaaaaacaaacaaacaaacaaacaaac---------------c-aaccaac 465
Query: 125 caataacaaaaaacaatactaaagggttttttctgtccatgtttagaatagagaaaaata 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caataacaaaaaacaacactaaagggttttttctgtccatgtttagaatagagaaaaata 405
Query: 185 atttagttaactttacagggagttacttatatttccatgcacattaattacagttgaaag 244
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 404 atttagttaactttacagggagttagttatatttccatgcacattaattacagttgaaag 345
Query: 245 aatcattaattgctatgga-gctggcatgtcaggatggccgagtggtctaaggcgccaga 303
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 344 aatcattaattgctatggaggc-ggcatgtcaggatggccgagtggtctaaggcgccaga 286
Query: 304 ctcaagctatggcttcctcgctctgagggttctggtctcccctggaggcgtgggttcgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcaagctatggcttcctcgctctgagggttctggtctcccctggaggcgtgggttcgaa 226
Query: 364 tcccacttctgacagctgtatttttctttcacagactcatctgttcattttctatgctag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tcccacttctgacagctgtatttttctttcacagactcatctgttcattttctatgctag 166
Query: 424 cctactccagaccttccgtgaaccttgtcccactgatctgtg 465
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cctactccagaccttccgtgaaccttgtcccactgatctgtg 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_j07.g1 MSMg01no352_j07.g1 CHROMAT_FILE:
MSMg01no352_j07.g1 PHD_FILE: MSMg01no352_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:11 2005
(337 letters)
>mm_chr13_21141681_21142416
Length = 736
Score = 611 bits (316), Expect = e-179
Identities = 334/344 (97%), Gaps = 8/344 (2%)
Strand = Plus / Plus
Query: 1 ctctgcaatccctcactgcatgaaaaagtggttgttaggtgttttcccatggcagcaaaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgcaatccctcactgcgtgaaaaagtggttgttaggtgttttcccatggcagcaaaa 260
Query: 61 gcactgggcactgggcactaggcctgctttagggggaccgggggtggggggcttgcactg 120
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 261 gcactgggcactgggcactaggcctgctttaggggga-cggggggggggggcttgcactg 319
Query: 121 tggggcatggctgcagggctgtctctctgcacttcccactctagactatggctcaagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggggcatggctgcagggctgtctctctgcacttcccactctagactatggctcaagcca 379
Query: 181 atttctgcctccaagaattctacgtggcactgactcacagttttatcctccacctgaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atttctgcctccaagaattctacgtggcactgactcacagttttatcctccacctgaggg 439
Query: 241 gtttagccaagtctgcctcagtataattctgagagtcttactctgta-------tcagag 293
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 gtttagccaagtctgcctcagtataattctgagagtcttactctgtactctgtatcagag 499
Query: 294 ggagacctatgaagtgagttttcttttttctttgcctctggagc 337
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggagacctatgaagtgagttttcttttttctttgcctctggagc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 736
Length adjustment: 9
Effective length of query: 328
Effective length of database: 727
Effective search space: 238456
Effective search space used: 238456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
