NNNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCGCTCTACCCAGTCGAGATGGAGAACTCTCAGTAAATTCGTG
AGAAAATTCTCCAGTTCACACCGCTATCACTAACCTAGGAAGCCAAGACC
ATCAAAGACAACAAGAGATGGGCTGTCCTCACTTTGTTAGCTCGTGTTTT
CATTTTCCACACTCAACTTCCTAGGGAGCCCAGAAAGAAAATGAACAACC
CTATCTATCTTTCATCAAGTCCCCTGAGCTGCTAGAGAGACCCTCTCAGT
TTCTCCGAGACCATTCTTTCTTTCTTTGTAGACCCACCTGCATGGGCGCC
TCGTGTCTCATTGTAGGCAAATGTCCTTTCTCTCTTGCTAGGACAGCGCT
GGTCCGGGAGCCTGGTCAAGCGTGCACAGCCTGCGCGCTCCCCGCAACAC
TCCGCACGCGTGGGGCTCTGTAGCCCGCTCCAACATCAGCACCGGAGCTG
TCCGCTCCTGACTCCGCACAAGCGTTCTGGCCAGGGACCCCGTGAGCTTC
TGGGAGTTGTAGTCTAATCTTAAGAGGCAAATGCTCAAATGGGAAAATTG
GGAACTACAATTCCCAGAGACCCAGAAAGATTTCCCTCGGTCTAGNCCCT
CCATTTGCTCTGTGCGGTGTAAATCTCCCTTCTTTTCAGTTANACCGGAT
GGTCTCGCTCTCAGTCTGCCTAACCATTTCTTCAAAG

GGTCAATGATATGGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGCTTGATCCTCTTGTGCTAC
AGATGTACAACATATCTGTAGGCACCTTGGAAGAGGCTTCAAAAATAATA
CTTACAGAGGCAAGCCAAAAATCCACCTTACAACATATGTAGATAGAACA
TCACTAAAAAACGTTATGCCTGACATTCTTAATCCACTCATCCCACACTG
AGAATACTCCCTCTCCACATCTCTTGCTTTGGGAAAAAATAAATCGCCAT
CATATAAATACTGGTGTGTGAACCGTAGTCATACTTTATGTGCATTACAG
ATGAGAACTTCACGACTGCTGCAGCTTATGTCCCGCAGTGTTGTCTTGGA
CAAAACAATATTTCTTTATAGTGCAACCGCAGCCACTCTGCATACGAATC
GGAATGTCTGATCTTTTTCTTCTTTCAGCACTTATCTCCTTAATACTATG
AATACAGGTCATCTAAACTCTACCAAATCTACTACTATGCTTGTATCTCG
GGTAGCTGGTCACCTCCCTGACCGACTCTTGACCTAACAGCTACAAGTGT
GGAACCTTCGTTATCCTTCCCCACCTCAGAGTATTTGAACTTAAAGTCTT
GGGCGCAAATCCGAAACACTTCCCGGGTTCCGCCCCCACTTTCATTGCCA
TCACTAATAGCTTTCCATGATAGTAATACCCTTGTTGGGTGAAAATGTTT
TTTCGTTCTTCTTCCA

Query= MSMg01no354_b11.b1 MSMg01no354_b11.b1 CHROMAT_FILE:
MSMg01no354_b11.b1 PHD_FILE: MSMg01no354_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:09 2005
         (543 letters)



>mm_chr13_111069715_111070657
          Length = 943

 Score = 1027 bits (531), Expect = 0.0
 Identities = 537/539 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcgctctacccagtcgagatggagaactctcagtaaattcgtgagaaaattctcca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgctctacccagtcgagatggagaactctcagtaaattcgtgagaaaattctcca 264

                                                                       
Query: 65  gttcacaccgctatcactaacctaggaagccaagaccatcaaagacaacaagagatgggc 124
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttcacaccgctatcactaacccaggaagccaagaccatcaaagacaacaagagatgggc 324

                                                                       
Query: 125 tgtcctcactttgttagctcgtgttttcattttccacactcaacttcctagggagcccag 184
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 tgtcctcactttgttagctcgtgttttcattttccacactcaacctcctagggagcccag 384

                                                                       
Query: 185 aaagaaaatgaacaaccctatctatctttcatcaagtcccctgagctgctagagagaccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagaaaatgaacaaccctatctatctttcatcaagtcccctgagctgctagagagaccc 444

                                                                       
Query: 245 tctcagtttctccgagaccattctttctttctttgtagacccacctgcatgggcgcctcg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctcagtttctccgagaccattctttctttctttgtagacccacctgcatgggcgcctcg 504

                                                                       
Query: 305 tgtctcattgtaggcaaatgtcctttctctcttgctaggacagcgctggtccgggagcct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtctcattgtaggcaaatgtcctttctctcttgctaggacagcgctggtccgggagcct 564

                                                                       
Query: 365 ggtcaagcgtgcacagcctgcgcgctccccgcaacactccgcacgcgtggggctctgtag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtcaagcgtgcacagcctgcgcgctccccgcaacactccgcacgcgtggggctctgtag 624

                                                                       
Query: 425 cccgctccaacatcagcaccggagctgtccgctcctgactccgcacaagcgttctggcca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccgctccaacatcagcaccggagctgtccgctcctgactccgcacaagcgttctggcca 684

                                                                      
Query: 485 gggaccccgtgagcttctgggagttgtagtctaatcttaagaggcaaatgctcaaatgg 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gggaccccgtgagcttctgggagttgtagtctaatcttaagaggcaaatgctcaaatgg 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)