Query= MSMg01no354_k23.b1 MSMg01no354_k23.b1 CHROMAT_FILE:
MSMg01no354_k23.b1 PHD_FILE: MSMg01no354_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:54 2005
(442 letters)
>mm_chr13_90693496_90694342
Length = 847
Score = 789 bits (408), Expect = 0.0
Identities = 432/443 (97%), Gaps = 5/443 (1%)
Strand = Plus / Minus
Query: 5 gaattcctgcgtatgtgttaaagcctcctttcaaacctgtccctctcagaattactccag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gaattcctgcgtatgtgttaaagcctcctttcaaacctgtccctctcagaattactccag 588
Query: 65 gctccctaaacctcaccccacgttctcaggtctatgtcgtctatgtctcccatctcctaa 124
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 587 gctccctaaacctcaccccacgttctcaggtctatgtcgtctacgtttcccatctcctaa 528
Query: 125 tatctcattcctttctcccttctggaggatgatggaagcaggatcattggttctgaacgt 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 527 tatctcattcctttctcccttctggaggatgatggaggcaggatcattggttctgaacgt 468
Query: 185 ttcctctgctgttggagagttgagatgttcacatgtttgtgagtttgtttctatgttttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttcctctgctgttggagagttgagatgttcacatgtttgtgagtttgtttctatgttttc 408
Query: 245 tctgctactatgtttggagtcatttagcttttagtgatacagataatactgagtccaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tctgctactatgtttggagtcatttagcttttagtgatacagataatactgagtccaaac 348
Query: 305 attgtaaattaaagggagtaaatattttctattcctccaagttttacttg-----ttaga 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 347 gttgtaaattaaagggagtaaatattttctattcctccaagttttacttgaggaaataga 288
Query: 360 tttattgcctagaatttaaaacgtatttctagaagtgaatttacatgatgaanagtgaga 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 287 tttattgcctagaatttaaaacgtatttctagaagtgaatttacatgatgaaaagtgaga 228
Query: 420 aaaataacaatataaaatcaaac 442
|||||||||||||||||||||||
Sbjct: 227 aaaataacaatataaaatcaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 847
Length adjustment: 10
Effective length of query: 432
Effective length of database: 837
Effective search space: 361584
Effective search space used: 361584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_k23.g1 MSMg01no354_k23.g1 CHROMAT_FILE:
MSMg01no354_k23.g1 PHD_FILE: MSMg01no354_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:54 2005
(416 letters)
>mm_chr13_90535119_90535934
Length = 816
Score = 750 bits (388), Expect = 0.0
Identities = 409/416 (98%)
Strand = Plus / Plus
Query: 1 attctgtatgcatgtctttctttatgcatgcctatgggtaagcgtcagaaataatttctt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 attctgtatgcatgtctttctttatgcatgcctatgggtaagtgtcagaaataatttctt 260
Query: 61 ttggattgacaggaagtgcctatttcttgtcctgcagtatgcggtgagtggagaacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggattgacaggaagtgcctatttcttgtcctgcagtatgcggtgagtggagaacaatg 320
Query: 121 gagcagaagcttcctgtctgtctctcgagctgtctgcagagctgtgctgtgtgagctcct 180
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 321 gagcagaagcttcccgtctgtctttcgagctgtctgcagagctgtgctgtgtgagctctt 380
Query: 181 tgagacagtagatctcatagcactctggtaagacaggaacagagtgaaatccatccatca 240
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tgagacagtagctctcatagcactctggtaagacaggaatagagtgaaatccatccatca 440
Query: 241 gctgcatttcgaaatgtctctttcagcaggtgggtagatcaacgtttgagttgatgcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gctgcatttcgaaatgtctctttcagcaggtgggtagatcaacgtttgagtggatgcatt 500
Query: 301 atgtgtgtcatcaacaaactagatctattgctaggggctgtcagcataattattatgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgtgtcatcaacaaactagatctattgctaggggctgtcagcataattattatgttc 560
Query: 361 aagcttaggagctcacagagggttatatgcatctttcagctctagggctacaaaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcttaggagctcacagagggttatatgcatctttcagctctagggctacaaaag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
