Query= MSMg01no356_n08.b1 MSMg01no356_n08.b1 CHROMAT_FILE:
MSMg01no356_n08.b1 PHD_FILE: MSMg01no356_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:40 2005
(513 letters)
>mm_chr13_46209758_46210670
Length = 913
Score = 698 bits (361), Expect = 0.0
Identities = 383/391 (97%), Gaps = 2/391 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagacaacatctctgtactgtcttcttccatttttatttagactttgagcatca 63
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggaattcggacaacaactctgtactgtcttcttccatttttatttagactttgagcatca 330
Query: 64 aactcagaccataagacttgtgcaggaatttcctgattggccactttgccaacccagtct 123
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 329 aactcagaccataagacttgtgcaggaatttcctgattggccactttgtcaacccagtct 270
Query: 124 tcagatatttagctggtgttgtgttgctttctatatcattatgaagaaaattgaaatttt 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 269 ttagatatttagctggtgttgtgttgctttctatatcattatgaagaaaattgaattttt 210
Query: 184 ttaagatttattttagtttcagttgtgtgtgtgtgtgtgttggcatatgtgtatatgctc 243
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 209 ttaagatttattttagtttcagt--tgtgtgtgtgtgtgttggcatatgtgtatatgttc 152
Query: 244 acatatccctctaaatctggagttagagttaattagtagcagcctgacatggttctggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 acatatccctctaaatctggagttagagttaattagtagcagcctgacatggttctggaa 92
Query: 304 attgaacccaggtcctctacaagagcagtacccattattaaccattgagccatctctcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 attgaacccaggtcctctacaagagcagtacccattattaaccattgagccatctctcta 32
Query: 364 gccttgaaatttgacattttatagtatataa 394
|||||||||||||||||||||||||||||||
Sbjct: 31 gccttgaaatttgacattttatagtatataa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_n08.g1 MSMg01no356_n08.g1 CHROMAT_FILE:
MSMg01no356_n08.g1 PHD_FILE: MSMg01no356_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:40 2005
(416 letters)
>mm_chr13_46051004_46051819
Length = 816
Score = 781 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 1 cattctctctggatttcacagaaaggcagaggcctcctgtctgctctttaacagagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattctctctggatttcacagaaaggcagaggcctcctgtctgctctttaacagagaacc 260
Query: 61 atgagtcaacagtccttgcttacccactgtttcaaggctctctcagccagaaaaatttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagtcaacagtccttgcttacccactgtttcaaggctctctcagccagaaaaatttac 320
Query: 121 tgtatgtgaggaaatcaggaagttgtaaaatccaaacagacacaaacaaacccaagactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatgtgaggaaatcaggaagttgtaaaatccaaacagacacaaacaaacccaagactc 380
Query: 181 aacaactcttggttgctgctgacccaacaaactgttctctgtttccctgaaaatgtagct 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaactcttggttgccgctgacccaacaaactgttctctgtttccctgaaaatgtagct 440
Query: 241 tgctatagtgagaaccttaaaaacgtgagaactgacactcaaggcagctggcagcttagt 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tgctatagtgagaaccttaaaaacgtgagaactgacactcaaggcagctagcagcttagt 500
Query: 301 gttctttacctaaaataatcagggagaagccccagtcagcaattattgatcctcacaaat 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gttctttacctaaaataatcagggagaagccccagtcagcaatcattgatcctcacaaat 560
Query: 361 ttgatgcagatttcttcccaaaccatagaccacaactacagatagtttcatccaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgatgcagatttcttcccaaaccatagaccacaactacagatagtttcatccaag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
