XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTT
CAGTTCTGAGCCCCATTTTTTAGTGGGGTTATTTGATTTTCTGAAGTCCA
CCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTA
GGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTCTTATT
GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATT
TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT
TTTTCCCCTGTGCCCATATTTTCAAGGCTTTTCCCCACTTTCTCCTCTAT
AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATT
TGACCTTAGTACAAGGAGATAAGTATGGATCAATTCGCATTCTTCTACAT
GATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTT
CCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTTGGTCTTCAGAAACACGGGAGATAGAAACCCTAAGA
AAGACATCTGGTATCTTATATCTGAGCATCTTCTCTTAACACCCGATATG
GTTCACAGAATTCTCATGTGTGTAATATTCCTTAACTATTTCGGTCCCCT
TTTCTATTTTATTTTTACTCGCCTTACATCCTATTCCTACTTTTCTTGCC
ACCTCGTAACTTTATTCTTATACGAG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTTTGTGTTGCATGGGAGAAGAGTGTGGAGTAG
ATCACAAAAAGACTTTTCCTGTGTAACCAGCTGAAACAGCTAGGAATGAA
TTGAACCTCAGTTGTTTAACTTGAAGCATCTGTGATTACAGAGTCGTGGA
TGAACTGCTTTACCTTTCTCATGGTTCTTGCCTTCAAGTGTGTAAGACTA
TTCTAATGGATTCAGTGATAGCTAATCTCATTGGCCATGTGACACTCCAT
GGAAAAAGGGAACCTTATCTGTAAAATTGTCTCCATCAAGATTGGCCTAG
AGACATGTTTGTGAGAACATTTTACTGTTTGCTGTTTGATGTAGATGATC
CCAGCCCACTGTGGGCAGCACCATACTTAAGCAGATGGACCTTGGTTGTA
TAAGAAAGGTATCTGAGCAAGAATAAGCCAGAGAACAAGCCAGTAACCTT
TGTTCTTTGGTCTCAAGCTCCTGCCTTGAGCTTCTGATGGTACATTGAAA
CATGTAAAATTAAATAAACCCTTTCCTCCCCTAAGATAGTTTGGTTATTG
GATTTACCTACAGGAATACAAAACAACCTCAGACAGACCCTTGAATGGCC
GGATTTTGAAAGTTTTATAAAAAAACCCCCTCCACCAAAAATTATGTCTG
CTGTTTGGTTTTTCGGTCGCTCCTCTCTTCCCCATTGACCAATCTTTATA
TTACACCCCCTTTTTATCATTTTCTTTT

Query= MSMg01no356_n19.g1 MSMg01no356_n19.g1 CHROMAT_FILE:
MSMg01no356_n19.g1 PHD_FILE: MSMg01no356_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:43 2005
         (513 letters)



>mm_chr13_20534947_20535859
          Length = 913

 Score =  922 bits (477), Expect = 0.0
 Identities = 504/513 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttgtgttgcatgggagaagagtgtggagtagatcacaaaaagacttttcctgtgtaa 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttgtattgcatgggagaagagtgtggagtagatcacaaaaagacttttcctgtgtaa 260

                                                                       
Query: 61  ccagctgaaacagctaggaatgaattgaacctcagttgtttaacttgaagcatctgtgat 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ccagctgaaacagctaggaatgaattgaacctcagttgtttaacttaaagcatctgtgat 320

                                                                       
Query: 121 tacagagtcgtggatgaactgctttacctttctcatggttcttgccttcaagtgtgtaag 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tacagagtcgtggatgaactgctttacctttctcatagttcttgccttcaagtgtgtaag 380

                                                                       
Query: 181 actattctaatggattcagtgatagctaatctcattggccatgtgacactccatggaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actattctaatggattcagtgatagctaatctcattggccatgtgacactccatggaaaa 440

                                                                       
Query: 241 agggaaccttatctgtaaaattgtctccatcaagattggcctagagacatgtttgtgaga 300
           ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 agggaaccttagctggaaaattgtctccatcaagattggcctagagacatgtttgtggga 500

                                                                       
Query: 301 acattttactgtttgctgtttgatgtagatgatcccagcccactgtgggcagcaccatac 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 acattttactgtttgctgtttgatgtagaagatcccagcccactgtgggcagcaccatac 560

                                                                       
Query: 361 ttaagcagatggaccttggttgtataagaaaggtatctgagcaagaataagccagagaac 420
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaagcaggtggaccttggttgtataagaaaggtatctgagcaagaataagccagagaac 620

                                                                       
Query: 421 aagccagtaacctttgttctttggtctcaagctcctgccttgagcttctgatggtacatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagccagtaacctttgttctttggtctcaagctcctgccttgagcttctgatggtacatt 680

                                            
Query: 481 gaaacatgtaaaattaaataaaccctttcctcc 513
           |||||||||||||| ||||||||||||||||||
Sbjct: 681 gaaacatgtaaaatgaaataaaccctttcctcc 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space:   454209
Effective search space used:   454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)