NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATATCTGTGCCCCTAAAACAGAAAGCTCTGAATACTTCTTAGC
TTTCAGCTAACAGTTACCCAAAATTCCAATAGACTAGCCTTAGGTCATCT
CCAAAACCCTGCTTGTATCTTAAAGCACAAGATGATTTCTTTTCTGGAAA
GTTTTTGCTACTGTTTTTATTTTCCCTTAAAGGGCTTTTAAGTCTTCCTT
CTAAGAATCTACCTGTTTAGGTAATATTTATAAAGAAGAATAACCATTTT
TAAAAATATATTTATTTCTACTTACTTTGTATATCCCCCACTATTCCCCT
ACCTCCTCTGAACTGGTGGGGCCCCCTGGATACCATCAAAGAAAACATAT
GGTGGGACTCCTGTCTCTAGATGCTTATGTAGCAGAGAATAGTCCAATCA
ACCATCATTGGAAGGAGAGGCCCTTGGTCTTGTGAAGGTTCTATGCTCCA
GTATAGGGGAATTTCAGGGCCAGGAAGTGGGTGGGTTGGGGAGCAGGGGG
AGGTGTGCNGGGATAGGGGATTTTCNGAGAGGANTTTAGGAAAGGGGATA
ATAATTGATTTGTAAATAAATTTTATATTCAAATTTAATAAAAGAAATAA
TTAGGTATTTATTTTTTTATTTAAATATAAGGGAATATTGAAATTTATTT
TTTAATTGTATTGAAGTTCAAGAAAATTTTTTTAAATATCCCCCTTG

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTGAATGTTCACAGAGAAGAGGAGGA
CTAGAGGGCTGTAATCATTTGGTGAATCATTTACTGAAGCCGGGTGGGGG
CTCAATGGGTGTTTGTTCAGGGACTAATTTTATGGCCAGTTGTAACTGTC
TGTGACCTCTGATTTTACCTTTTCTTCAGGATTTAATCACAAGGCCATAA
TTGCCCTTGAGTTTGTTATTTCTCTAAGGTCTCAAAAACAGGCACCTGGA
GAGTTCTGCAACTTATCATATAGAGTGCTGGTTTTTGGAGATGCAAAGGC
AGGGAAGATGTCTCTTGCTGTCTCTTTGGGATGTCTCCATTAAGGGGGAG
TTTCATGGGTAGTGCCATTCTAATGCTACGGGAGTGGCCAGGGAGGGAGA
GGGAACCCAGGGCTTGCTGCAGGAGGATGCAGCACAGAAAACAGCTGTCT
TTGTATCTTGCTTGCACTGGGCAGAGGGAGGTGCTGGCTTCTGGCAGGGG
GTTAGGAACACAGGCAAATGGTCTATACACAGCACTGAAGTTTCTCTAGG
AACAGTGATTCTGGGGTTTACAACAGGTGTAGAGCTTAAGGCCAACATTT
GCTCCATTCCCTGGGTTCATACAAAAAAAACCCCCTGGTAACTGGGTGGG
GATAAAAATCCTGATCCCCCCCAATCTCTGTGGGGTCCCTCTTTCCTTCC
TTGTTCAGGTCT

Query= MSMg01no360_i17.b1 MSMg01no360_i17.b1 CHROMAT_FILE:
MSMg01no360_i17.b1 PHD_FILE: MSMg01no360_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:19 2005
         (500 letters)



>mm_chr13_86467499_86468394
          Length = 896

 Score =  803 bits (415), Expect = 0.0
 Identities = 439/449 (97%), Gaps = 4/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatatctgtgcccctaaaacagaaagctctgaatacttcttagctttcagctaa 64
           ||||||||||||||||  ||||||||    ||||||||||||||||||||||||||||||
Sbjct: 445 gaattcaatatctgtggtcctaaaac----agctctgaatacttcttagctttcagctaa 390

                                                                       
Query: 65  cagttacccaaaattccaatagactagccttaggtcatctccaaaaccctgcttgtatct 124
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 389 cagttacccaaaattccaatagactacccttaggtcctctccaaaaccctgcttgtatct 330

                                                                       
Query: 125 taaagcacaagatgatttcttttctggaaagtttttgctactgtttttattttcccttaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 taaagcacaagatgatttcttttctggaaagtttttgctactgtttttattttcccttaa 270

                                                                       
Query: 185 agggcttttaagtcttccttctaagaatctacctgtttaggtaatatttataaagaagaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agggcttttaagtcttccttctaagaatctacctgtttaggtaatatttataaagaagaa 210

                                                                       
Query: 245 taaccatttttaaaaatatatttatttctacttactttgtatatcccccactattcccct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 taaccatttttaaaaatatatttatttctacttactttgtatatcccccactattcccct 150

                                                                       
Query: 305 acctcctctgaactggtggggccccctggataccatcaaagaaaacatatggtgggactc 364
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acctcctctgagctggtggggccccctggataccatcaaagaaaacatatggtgggactc 90

                                                                       
Query: 365 ctgtctctagatgcttatgtagcagagaatagtccaatcaaccatcattggaaggagagg 424
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 89  ctgtctctagatgcttatgtagcagagaatagtccaatcgaccatcattggaaggagagg 30

                                        
Query: 425 cccttggtcttgtgaaggttctatgctcc 453
           |||||||||||||||||||||||||||||
Sbjct: 29  cccttggtcttgtgaaggttctatgctcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 896
Length adjustment: 10
Effective length of query: 490
Effective length of database: 886
Effective search space:   434140
Effective search space used:   434140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)