TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGAGCTATACAGGAAGGTTATGAGAATGAAATGATAAGTAACCTA
GAGATAAAGCTCCCTAGAGGGAAGAGGAGACACCTACAGTTCTGCCAGCC
CCACACAGCCTATACCTGAGCTTACATGAGCAGCAGAGATCCCTTACACA
CAGCTGCCTGAGCTTGTGCAAGTCCAGGGTGCTGTGTTTGAGCCTAGCTG
TTACCCAAGCTGAGGTAATTAGGCTGTCCTACAGGTGACCTCTCACCCAT
GTTTCTGTAGGAAAAGCCTGGAAACTCACGGGCTCAGCAAGCTAAACTTG
GAGGCAACTGTTTTTCTGGTCTGTTCTTGGTGCCTTCTCCTGAGTGAATA
AACACTTGTTCTCATCTCCCAAGAAGTCACACAGGACCTTTTGTCTCTCT
CTCACTCCTCTGAGCAGCAAGCATCCCTCTGACAGATTCTGGCATCTTGA
CACTGCACTTCCTTGCCTCTAAAACTATGAGCCAATGTGCTTCTGTTTGT
TGGAAACTCTCTGCCATTAGTTAGCCTACCGCAGCTGTACCCAATAAACT
AAAGCACAGGGTTCCATCTTTATACTCTAAATGGTACACAAACAAAAACA
AAATTAGAAGAGTACTCGAAACATATACAGCTATAAAATGACTCCAGATG
GGGGCGGGGGCTTACTCAGGTGGGGAGACTGGGCCAGCATCCGG

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTAGAATATCTAGGTGTGTTGGCAGAA
TCCTTAAACTCTACCACTGGGAAAGAGATGTGGTGGGGAGATTATAAAGT
TAGGCAAGCAAGCCTGGGGGTTCTTGAAAGACCTTGTGTCTAAAGAGAGT
GATAATATGCAGAAGTGGAACTCTATGTTTTATTTTAGGGAAACTATTCA
GTGCAATGGTAGAAAACATCTCTCTTGACTTCCTTGAATTTAAGATGTAT
TTCTTTGTACAATTTTACAGGCCACCCAACGAGACAATGTGGATTGTGCT
TCCGTATTGCTCACCCACAATGCGGATCCAAATCTGATAGATTCCAGTGG
GAACACAGCCTTCCACCATGCTATATCCAGGGGTAACATAAGGATTGTAA
AAATGCTCCTTGAGCACAACGTAGACATTGAAGCCAAAACAGAGGTAAAG
ATCACTCAACTTCATTCCCAAGGCACCTCTAGCAGTGACACGCACATCTA
TTTTCTACACACAGAAGCTCATGCATTTTCACTGTATCTGTTCAGTGGAA
CACTTTTATTTTCACCAAATATGTTTTTTCATATTTTTGGTAGGTCATTC
AAAAAAAAAATAGTGGATTTTGTCTCAGAATTGGGCTTGGATATTAAATT
TCTAAATTAAGCATTTATGACCCCTCAAACTTCTCATTACCTCAGA

Query= MSMg01no360_n02.b1 MSMg01no360_n02.b1 CHROMAT_FILE:
MSMg01no360_n02.b1 PHD_FILE: MSMg01no360_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:40 2005
         (584 letters)



>mm_chr13_58356020_58357003
          Length = 984

 Score = 1077 bits (557), Expect = 0.0
 Identities = 575/581 (98%), Gaps = 1/581 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagagctatacaggaaggttatgagaatgaaatgataagtaacctagagataaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaagagctagacaggaaggttatgagaatgaaatgataagtaacctagagataaa 263

                                                                       
Query: 65  gctccctagagggaagaggagacacctacagttctgccagccccacacagcctatacctg 124
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 gctccctagagggaagaggagacacctacagttctgccagccccacacggcctatacctg 323

                                                                       
Query: 125 agcttacatgagcagcagagatcccttacacacagctgcctgagcttgtgcaag-tccag 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 324 agcttacatgagcagcagagatcccttacacacagctgcctgagcttgtgcaaggtccag 383

                                                                       
Query: 184 ggtgctgtgtttgagcctagctgttacccaagctgaggtaattaggctgtcctacaggtg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtgctgtgtttgagcctagctgttacccaagctgaggtaattaggctgtcctacaggtg 443

                                                                       
Query: 244 acctctcacccatgtttctgtaggaaaagcctggaaactcacgggctcagcaagctaaac 303
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acctctaacccatgtttctggaggaaaagcctggaaactcacgggctcagcaagctaaac 503

                                                                       
Query: 304 ttggaggcaactgtttttctggtctgttcttggtgccttctcctgagtgaataaacactt 363
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 504 ttggaggcaactgtttttctggtctgttcttggtgccttctcctgcgtgaataaacactt 563

                                                                       
Query: 364 gttctcatctcccaagaagtcacacaggaccttttgtctctctctcactcctctgagcag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttctcatctcccaagaagtcacacaggaccttttgtctctctctcactcctctgagcag 623

                                                                       
Query: 424 caagcatccctctgacagattctggcatcttgacactgcacttccttgcctctaaaacta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caagcatccctctgacagattctggcatcttgacactgcacttccttgcctctaaaacta 683

                                                                       
Query: 484 tgagccaatgtgcttctgtttgttggaaactctctgccattagttagcctaccgcagctg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgagccaatgtgcttctgtttgttggaaactctctgccattagttagcctaccgcagctg 743

                                                    
Query: 544 tacccaataaactaaagcacagggttccatctttatactct 584
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacccaataaactaaagcacagggttccatctttatactct 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)