NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTCAAGAAGAACTAGGCTCAATGAGGTGACATGAAGTTGCC
AGACCTATAAGGGTAGAGAACTCCTATACAATGTAACACATTTTTGAGTA
CACAGAAACAAAACCAAGCTTATAACACAGTCTATATTACAAATGTAGTA
CTGATTTCAAAATGTAACAGAGAAACCCTTTGGCTGTCAATTTTACTTTT
GAATGCTGATGGATTATCCCAATAAAATAGCAAACAGAGCCCAGTAGCAA
ATTGAAAAATTAAAGCAGCATGGTAGAACTTATCCTAGATATGCAAAAAT
ATTTAATATTACAAAATTGTATTAAGAAAATTTACCCTATACTTAGGTAA
AATAAAAAATATTGTCACCTTTGGGAGGCTCAGAGGCATTTAATAACGTT
TGAGTTTCATTCTTGAGTCTTGAAGTCTTTCAATAGATAGATGTTAGGCA
AATATGTACACACAAAGTCAGTATGATTCTTGGCAGGAAATGGAAACATT
TCCATTAAGATGAACACAGAGCAGACTTCCTTTATAATGCTCTTATTAGC
AAATTCTAAGTGAGTCTAGCCAGTGTAATTAGATTAAGACAACAAGAAAG
GAAATATGCAAGATTTATGTGAAAAATGTAAATGTCGGTAAAAGATCTGA
AGACCAACAAAAGAACATTTTCCCAAATGAAAAGCATACTGTAATTGCTT
TTGGATAGGG

ATCCAATTAACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGCAGAGGAATC
TTGAATGGCAGAGAAGCACTTAAAGAAATGCTCAAAATTCTTAGCAATCA
TGGAAATGCAAACCAAAACAACTCTGAGGTTCTACCTTATGCCCATCAGA
CTGACTAAGATCAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAA
ACAAAACAAAACAAAAATCAAGAGATAACACACACTGGGTGAGGATGTTG
GAACAAGGGGGAACACTTCTTCATTGTTTAGTATCCTTAAAAAGAAAATT
GGGAGTCTCTAGAAGGGCCATCCTTTTCTTCTCAGCTCCAAACTTTGTCC
CTGTAACTCCTTCGAAGGNTGGTTTTGCTCCCAGTTTCCAAAAAGGGGCA
AAATGGCCCCACCCTTGGGCCTTAAATTCTTCCTGGAATTTCCCGGTGGT
TAACCAAAATGGAAACTAAAAATTTGGGGAAACCCCAAATTTTTGGGGTT
TAAAATCCCTCTTTCCCCGGGGAATAATTTTTGGGGGGAATCTCTTTTGG
GAACGGGGTAACTTCCTCCCCGGAAAGAAGCCCCCCCCGTTTTCCTCCCC
TTTTTCCCAAGAAGATTCCCAAAAACCCTTTCCTTTTTTATAAAACCTTA
ACAACACCCCCCTCCTGTTTTGGAAAACCCCCCCCCTTTTTT

Query= MSMg01no361_c04.b1 MSMg01no361_c04.b1 CHROMAT_FILE:
MSMg01no361_c04.b1 PHD_FILE: MSMg01no361_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:05 2005
         (634 letters)



>mm_chr13_102174533_102175565
          Length = 1033

 Score = 1180 bits (610), Expect = 0.0
 Identities = 625/630 (99%), Gaps = 1/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctcaagaagaactaggctcaatgaggtgacatgaagttgccagacctataagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcaagaagaactaggctcaatgaggtgacatgaagttgccagacctataagg 264

                                                                       
Query: 65  gtagagaactcctatacaatgtaacacatttttgagtacacagaaacaaaaccaagctta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtagagaactcctatacaatgtaacacatttttgagtacacagaaacaaaaccaagctta 324

                                                                       
Query: 125 taacacagtctatattacaaatgtagtactgatttcaaaatgtaacagagaaaccctttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taacacagtctatattacaaatgtagtactgatttcaaaatgtaacagagaaaccctttg 384

                                                                       
Query: 185 gctgtcaattttacttttgaatgctgatggattatcccaataaaatagcaaacagagccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgtcaattttacttttgaatgctgatggattatcccaataaaatagcaaacagagccc 444

                                                                       
Query: 245 agtagcaaattgaaaaattaaagcagcatggtagaacttatcctagatatgcaaaaatat 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 agtagcaaattgaaaaattaaagcagcatggtagaacttatcctagatatgc-aaaatat 503

                                                                       
Query: 305 ttaatattacaaaattgtattaagaaaatttaccctatacttaggtaaaataaaaaatat 364
           |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttaatattacaaaattgtgttatgaaaatttaccctatacttaggtaaaataaaaaatat 563

                                                                       
Query: 365 tgtcacctttgggaggctcagaggcatttaataacgtttgagtttcattcttgagtcttg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtcacctttgggaggctcagaggcatttaataacgtttgagtttcattcttgagtcttg 623

                                                                       
Query: 425 aagtctttcaatagatagatgttaggcaaatatgtacacacaaagtcagtatgattcttg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagtctttcaatagatagatgttaggcaaatatgtacacacaaagtcagtatgattcttg 683

                                                                       
Query: 485 gcaggaaatggaaacatttccattaagatgaacacagagcagacttcctttataatgctc 544
           | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggaggaaatagaaacatttccattaagatgaacacagagcagacttcctttataatgctc 743

                                                                       
Query: 545 ttattagcaaattctaagtgagtctagccagtgtaattagattaagacaacaagaaagga 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttattagcaaattctaagtgagtctagccagtgtaattagattaagacaacaagaaagga 803

                                         
Query: 605 aatatgcaagatttatgtgaaaaatgtaaa 634
           ||||||||||||||||||||||||||||||
Sbjct: 804 aatatgcaagatttatgtgaaaaatgtaaa 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space:   638352
Effective search space used:   638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)