CTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGCCCCAATTCAGCAGGAAGCAGTCAGGGAAAGCTGTCATCCC
AATCCCAGGTTTTGGTTATTTTATGAATTATAGATATGTTGTCATTTAAG
GGATAATTTGCAAATGTTGTAGTTTTGGACAGGGAGGAAATAAATGGAAA
GCTTAGACTCAGGGATCTTTATCTTTCCTTTCCTCTTCTCTATCCTTCCT
TCTTAGGTAAAAGGAAGGGGACTGCAAAGAAAATGAGGGGATAGAGTAAT
TTTATAAGAAATTAGATAGATGGGCTGGAGAGATTGCTCAGTGGTTAAGA
GCACTGACTGCTTTTCCAAAGGTCCTCAGTTCAAATCCCAGTAACCACAT
GATGACTCACAACCATCCATAATGAGATCTGACACCCTCTTCTGGAGTGT
CTGAAGACAGCTACAGTGTACTTACATATAATAAGTATATAAATCTTATG
AAAATAAAGGATATTACATTAATGGGGATGGAGCATTAGATTTACTTTTA
AACACTGCTTTCTATATCTATAATCTAATGTTGTTAGAATTCTTTTTATT
TTGCTGTTTAACTGTAAGTATCTCCTTCTTATATTGGCTCTTTGCATTTT
TAATGTATGGACTTTCTTGAACTGTCATTTTCCCTGTCACTCCTTTTTCA
TAATTACCTTTCTATTATTGTACTTACCTTCCTTACCCCTTTTTTTCCAC
ATTCTTTGTCTTCCTTTTT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTATTTATATACATATGTCTTG
TTCCCTTAGAACATCTAGTATTCCTCTAGGTCCCTTGTCTTCTACGAACC
TCATAATGCCCAATTGGCCCTGAAATCTATCCAGCTACATCCTCTACCTT
AATCTCCCCAAGGGATAACATTTTACTCAGTCTCCATTCCTATCAGGGAG
AATTGTCTTCTTCATACTTCTTTGAGCCAATATTTCTGCAGACATAAGAG
TCAAACTATTCCACGTGGAATTTCTATACTCAATTAATTTACAGGAGTCC
TTACCATGCATCTACTTTAGGTAAATTAAGTAATGTTTTTGGTTTTGTAT
ACTTACCTGCTATGAAACTCAAGGTTCTCCAGGAGCAGCAAAGTCAGTAG
TAAATGTATATTATAAGATTTATTAAAAAAGAATTTGTTTATATAACTTC
ATGATCGGCCCTTTGGCCAGCAGTGCTCAAATGGTGAGAGGGCTCCATAT
AAGGAGTCTTCTGTCCTGTGAAAGTAAACATGCCTGAACTCCAGTTCACT
CTGCTACACATTTTCCTCTATATCACCTAAAGCTGGAGATTGAACCCATT
TGGTGTTGTGCCCAGACTCCAGCTTCTATGTAGCTGGCTAGCCTCCAGGG
ATAATTTGATGTTCTGCAGTGTGACAATAATAATTTATCTTCTGAGNAAA
ATGGAAAGTAAAA

Query= MSMg01no361_m16.g1 MSMg01no361_m16.g1 CHROMAT_FILE:
MSMg01no361_m16.g1 PHD_FILE: MSMg01no361_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:56 2005
         (561 letters)



>mm_chr13_15221969_15222929
          Length = 961

 Score = 1054 bits (545), Expect = 0.0
 Identities = 557/561 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttatttatatacatatgtcttgttcccttagaacatctagtattcctctaggtcccttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatttatatacatatgtcttgttcccttagaacatctagtattcctctaggtcccttg 260

                                                                       
Query: 61  tcttctacgaacctcataatgcccaattggccctgaaatctatccagctacatcctctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttctacgaacctcataatgcccaattggccctgaaatctatccagctacatcctctac 320

                                                                       
Query: 121 cttaatctccccaagggataacattttactcagtctccattcctatcagggagaattgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaatctccccaagggataacattttactcagtctccattcctatcagggagaattgtc 380

                                                                       
Query: 181 ttcttcatacttctttgagccaatatttctgcagacataagagtcaaactattccacgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttcatacttctttgagccaatatttctgcagacataagagtcaaactattccacgtg 440

                                                                       
Query: 241 gaatttctatactcaattaatttacaggagtccttaccatgcatctactttaggtaaatt 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gaatttctatactcaattaatttacaggagtccttaccatgcgtctactttaggtaaatt 500

                                                                       
Query: 301 aagtaatgtttttggttttgtatacttacctgctatgaaactcaaggttctccaggagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtaatgtttttggttttgtatacttacctgctatgaaactcaaggttctccaggagca 560

                                                                       
Query: 361 gcaaagtcagtagtaaatgtatattataagatttattaaaaaagaatttgtttatataac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaaagtcagtagtaaatgtatattataagatttattaaaaaagaatttgtttatataac 620

                                                                       
Query: 421 ttcatgatcggccctttggccagcagtgctcaaatggtgagagggctccatataaggagt 480
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 ttcatgatcggccctttggccagcagtgctcaaatagtgagagggctccatataaggagt 680

                                                                       
Query: 481 cttctgtcctgtgaaagtaaacatgcctgaactccagttcactctgctacacattttcct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttctgtcctgtgaaagtaaacatgcctgaactccagttcactctgctacacattttcct 740

                                
Query: 541 ctatatcacctaaagctggag 561
           || |||||| |||||||||||
Sbjct: 741 ctgtatcacttaaagctggag 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space:   524001
Effective search space used:   524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)