Query= MSMg01no362_i09.b1 MSMg01no362_i09.b1 CHROMAT_FILE:
MSMg01no362_i09.b1 PHD_FILE: MSMg01no362_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:55 2005
(467 letters)
>mm_chr13_93216838_93217708
Length = 871
Score = 861 bits (445), Expect = 0.0
Identities = 463/471 (98%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 1 tgtatccctctacttgttctttttgatgtgagcctgcctctgaggagctttcaaggttct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 671 tgtatccctctacttgttctttttgatgtgaacctgcctctgaggagctttcaaggttct 612
Query: 61 gagagtcacaagagtcatacgttcatgaacaaaagcaaggatagttaagtgttaaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gagagtcacaagagtcatacgttcatgaacaaaagcaaggatagttaagtgttaaaaaga 552
Query: 121 aagat----tcagacgggccatatctcttcctgtagaaactgagattgatccagtctgct 176
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagattcagtcagacgggccatatctcttcctgtagaaactgagattgatccagtctgct 492
Query: 177 ggcccaagaaggacttccgtcagggtttgacatagacaggcccgcagaggaactgggatt 236
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 491 ggcccaagaaggacttccgtcagggtttgacatagacaagcccgcagaggaactgggatt 432
Query: 237 actgttctagtggccacattcgtattacttttctgattttactgtcattactcgtctctc 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actgttctagtggccacatccgtattacttttctgattttactgtcattactcgtctctc 372
Query: 297 ttctgtatacccatttatccgtaagctgagaccacaatttgacccgtcacatggttttgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttctgtatacccatttatccgtaagctgagaccacaatttgacccgtcacatggttttgg 312
Query: 357 aacatgacggtttcctgcatctcagggacgaagaaatggaacagacatctgatctccaaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 311 aacatgacggtttcctgcatctcagggacgaagaaatggaacagacatctggtctccaaa 252
Query: 417 catttccctgtggcctccatgtcgagactccatccaggttgtggggaaggc 467
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 catttccctgtggcctccatgtcgagactccatccaggttgtggggaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 871
Length adjustment: 10
Effective length of query: 457
Effective length of database: 861
Effective search space: 393477
Effective search space used: 393477
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_i09.g1 MSMg01no362_i09.g1 CHROMAT_FILE:
MSMg01no362_i09.g1 PHD_FILE: MSMg01no362_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:55 2005
(491 letters)
>mm_chr13_93079931_93080821
Length = 891
Score = 926 bits (479), Expect = 0.0
Identities = 488/491 (99%)
Strand = Plus / Plus
Query: 1 ttttaaatgcggacatgagattattagacaaattatccacaggagtgatcgtccatctct 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaaatgtggacatgagattattagacaaattatccacaggagtgatcgtccatctct 260
Query: 61 tctattgataagctcgtccctcgtgttcttcctcagttaccctgtgcagactcactgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctattgataagctcgtccctcgtgttcttcctcagttaccctgtgcagactcactgtgc 320
Query: 121 cctgtaagcttccactcactgtgcctctgtggagaataccatggctcgcaactcctttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtaagcttccactcactgtgcctctgtggagaataccatggctcgcaactcctttcc 380
Query: 181 tgtgcacacctctgtcacatgctatcttctcagcatggcttttgctgctagcctactaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgcacacctctgtcacatgctatcttctcagcatggcttttgctgctagcctactaaa 440
Query: 241 agttcaaccctcttctctgccttactctctgcttagtgtttgtcacactaacacactgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttcaaccctcttctctgccttactctctgcttagtgtttgtcacactaacacactgac 500
Query: 301 tgtgaatgccacatagacacagacacgttcactcctaagacaatcctaagataatgccaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 tgtgaatgccacatagacacagacacgttcactcctaagacaatcctaagatgatgccaa 560
Query: 361 actgtcaatgatcacgggcagaaacgtcttcatttttcttcatacacaactgtgttgttt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 actgtcaatgatcacgggcagaaacgtcctcatttttcttcatacacaactgtgttgttt 620
Query: 421 gacatttttttacagacgttaaaaaggatcacaaaatgccctctgtctaccagtaatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacatttttttacagacgttaaaaaggatcacaaaatgccctctgtctaccagtaatgct 680
Query: 481 tcatcacttag 491
|||||||||||
Sbjct: 681 tcatcacttag 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
