ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCCGGTGACAGATTGTGGTTTTGTTCTTTTTTCTCTGGGGAGCTGTTC
AGGGCTTTATATATATAAAAGCAAGTCATTCATGTTTTTGAAAAAATTAG
GATCCTGGCAGTTTCTCCCATAGTAAAAACAAACAAACCAAAATCAAGCC
AAACCAAAAATCAAAACATTACTCTAGTAGCTTCTTTCTTTCACTCTGAT
TTCTGAAGTAAGACTAGACACTGAGCTGGAAAACACTTGTATGTGATACC
CTGGTGAGCTTACAGTGTTTCAGTCTTGCCTAGCAAGTATTCATGTATCT
GGCCCCACTTTGTCCCAGTTGTGATTTGCCCCATAGACTTTGCCCCTTGA
CCAAACTGGTCTGCAGTTTCCTGCCTGCATTGATTTCATTGAAGCCCCTT
TCATCAAGCAACAAGCGAGTAAAAGATGCCCCTTTGCTGGGATCTCCATC
TTCATCAGTAACCTAGTGTTTCTAAGGACTTGTTTCAATAGGAAATAAGC
CTATCTGTCTTTGAATGGGTCTCATTTGTGTCCCTGTCCAGTTTGACAAA
CACTTAAGTCTGGGCGAACAGTCCCAGCAAGGTCTGTGGTGACAGGTAGC
TCCAACTGCATCCTGTATTAACATCCCGTCTCTAGCCCAATGCAATCATG
TAATAACCGGGTTTCAGGGCCGGGATTTTGTGGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTATTGGTCAAAATAGGTATTAA
GAAAAAATATGTGTCCAATTTAAAAAGTTATTATTTTTTATTTATTTGTA
TATATATATATATGTATATATATATACATATATATGTGTGTGTGTATGTG
TGTGTGCCTGGCTTGTTCTTTTTTTTCTCGTGTTCTGGCGCGTTCGCGTT
TTGTTTGCGTGGTTGCCCTTCGGGGTTGTGTGTGTGTGTGGGTGGGCGTG
TCGTGGTGGCCCCCTTTTTTTTTTTTTGCGGGGCCCCCGCCGCGGCCCGC
GCGGGGGGGCTTTTTTTCTCGCCCCCCTCCCTTCGTGTGCCTCTTCGTGT
GTCTCCTCTCCGCGGTGTTTTCCTCGTGTTTTCCCTTCTGGTGCTGTGTT
GTCGTTCCCCTTTCGGTTTTTTTGTCCCTCTTGCCTTGTGTCTTTTGTTT
TCCTTTTTCTGTTTGTTTCCGCTGGCTGTTGCGTGGTGCGGTCGCCCTTT
GTCTGCTCCCCCTTTCTCCTCTTTCTCTTCCTGTCGCCCGCTCCCCGCCT
CCCGTTGTCGCCCTTTCGTTGCCCCGCTTTCTCCTTTCTTGTCGTCCCTT
TTTATCTTCCCCCCGCCCCTTTTATTTTTCTCCCCTGATGTGCGTGCCGT
TTTTGCGCACTCCCTTTCTCTCTTTTGTTTCGCGCCCTTCCTTTGGCTTT
TTTCACACTTCCTTGTTCCTCCTCTCCTTTGTCCTCTCCTTGTGACCTGT
GTTATTTCTTTTCCTCCACCCGTCTGTCACCTCTTTCTCCTTGTTTCCTG

Query= MSMg01no363_h03.b1 MSMg01no363_h03.b1 CHROMAT_FILE:
MSMg01no363_h03.b1 PHD_FILE: MSMg01no363_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:09 2005
         (548 letters)



>mm_chr13_115814279_115815226
          Length = 948

 Score = 1029 bits (532), Expect = 0.0
 Identities = 541/544 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccggtgacagattgtggttttgttcttttttctctggggagctgttcagggct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gaattctccggtgacagattgtggttttgttcttttttctctggggagctgttcagggct 689

                                                                       
Query: 65  ttatatatataaaagcaagtcattcatgtttttgaaaaaattaggatcctggcagtttct 124
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 688 ttatatatataaaagcaagtcattcatgtttttgaaaaaactaggatcctggcagtttct 629

                                                                       
Query: 125 cccatagtaaaaacaaacaaaccaaaatcaagccaaaccaaaaatcaaaacattactcta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cccatagtaaaaacaaacaaaccaaaatcaagccaaaccaaaaatcaaaacattactcta 569

                                                                       
Query: 185 gtagcttctttctttcactctgatttctgaagtaagactagacactgagctggaaaacac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtagcttctttctttcactctgatttctgaagtaagactagacactgagctggaaaacac 509

                                                                       
Query: 245 ttgtatgtgataccctggtgagcttacagtgtttcagtcttgcctagcaagtattcatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttgtatgtgataccctggtgagcttacagtgtttcagtcttgcctagcaagtattcatgt 449

                                                                       
Query: 305 atctggccccactttgtcccagttgtgatttgccccatagactttgccccttgaccaaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atctggccccactttgtcccagttgtgatttgccccatagactttgccccttgaccaaac 389

                                                                       
Query: 365 tggtctgcagtttcctgcctgcattgatttcattgaagcccctttcatcaagcaacaagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 388 tggtctgcagtttcctgcctgcattgatttcattgaagcccctttcatcgagcaacaagc 329

                                                                       
Query: 425 gagtaaaagatgcccctttgctgggatctccatcttcatcagtaacctagtgtttctaag 484
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagtaaaagatgcccctttgatgggatctccatcttcatcagtaacctagtgtttctaag 269

                                                                       
Query: 485 gacttgtttcaataggaaataagcctatctgtctttgaatgggtctcatttgtgtccctg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacttgtttcaataggaaataagcctatctgtctttgaatgggtctcatttgtgtccctg 209

               
Query: 545 tcca 548
           ||||
Sbjct: 208 tcca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)