Query= MSMg01no365_h08.b1 MSMg01no365_h08.b1 CHROMAT_FILE:
MSMg01no365_h08.b1 PHD_FILE: MSMg01no365_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:58 2005
(321 letters)
>mm_chr13_99037121_99037841
Length = 721
Score = 613 bits (317), Expect = e-180
Identities = 320/321 (99%)
Strand = Plus / Plus
Query: 1 gtctacacaccatctacaacaaaacatttctcacccataaaacagtcaactactttaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctacacaccatctacaacaaaacatttctcacccataaaacagtcaactactttaacc 260
Query: 61 aacaagcacaggggaaacgaggtctctaccacacctctgttagcaaattgtaagtatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaagcacaggggaaacgaggtctctaccacacctctgttagcaaattgtaagtatgcc 320
Query: 121 ttagaatgtatcaaaatactgtgtaaataactaatgccattcaaatcaggagtttgtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagaatgtatcaaaatactgtgtaaataactaatgccattcaaatcaggagtttgtatt 380
Query: 181 tgaaatattaggttcagtaaataaatattctagctttaaaagcttaagtgatacattaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaatattaggttcagtaaataaatattctagctttaaaagcttaagtgatacattaat 440
Query: 241 tctattaataagttgatactttttcatgtgttgttctgtgtttgaaagtttgttatatct 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctattaataagttgaaactttttcatgtgttgttctgtgtttgaaagtttgttatatct 500
Query: 301 ctatgagagcatatacagttt 321
|||||||||||||||||||||
Sbjct: 501 ctatgagagcatatacagttt 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_h08.g1 MSMg01no365_h08.g1 CHROMAT_FILE:
MSMg01no365_h08.g1 PHD_FILE: MSMg01no365_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:58 2005
(443 letters)
>mm_chr13_99210582_99211423
Length = 842
Score = 797 bits (412), Expect = 0.0
Identities = 437/448 (97%), Gaps = 6/448 (1%)
Strand = Plus / Minus
Query: 1 catgttttcagatacccgccaagtgtgctgaagaatttcagtcttatgcctgtgtctcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 536 catgttttcagatacccgccaagtgtgctgaagaatttcagtcttatgcctgtgtctcga 477
Query: 61 gtcagcactggtcaaatcggctagcacctcaggaggtagcaataggtcccaagggaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gtcagcactggtcaaatcggctagcacctcaggaggtagcaataggtcccaagggaaata 417
Query: 121 atgctgactgggggacacttctcttagtgattgtgtctttaggaaaatcttgtgtccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atgctgactgggggacacttctcttagtgattgtgtctttaggaaaatcttgtgtccttc 357
Query: 181 aaagcctagtacgcatcatctttcttctggctgccatgaaatgtattcctctcactgagg 240
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 356 aaagcctagtacgcgtcatctttcttctggctgccatgaaaagtattcctctcactgagg 297
Query: 241 aaaccgactgactccttatagaggctggctggctattggatcaggactggacgctcaacc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aaaccgaccgactccttatagaggctggctggctattggatcaggactggacgctcaacc 237
Query: 301 ttccagacttccgggaaacctgctgacgcatttcgctcccgcccctcctctcccctcccc 360
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttctagacttccgg-aaacctgctgacgcatttcgctcccgcccctcctctcccctcccc 178
Query: 361 tcccctcccct-----tggtaggcagggagccagggcagggccaaagcagctctcagtgc 415
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tcccctcccctccccttggtaggcagggagccagggcagggccaaagcagctctcagtgc 118
Query: 416 ttcaactgttaactcggatttttccaaa 443
||||||||||||||||||||||||||||
Sbjct: 117 ttcaactgttaactcggatttttccaaa 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
