XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCTTATTCAGAAATAAATCATTAACCAAGCTATTTCTAAGTTCGATTT
GAAAGGCTTGAATATGTCATTAATATATTTCCCCCTGTACTTTCTCTTGA
TTAAGGTGCCCGTGTCTCAGGGCTGCTTTCCCTCTGACTCTGACTCTTGG
CTATTCTAGCTCTCAGTTCTTTTCCCCTGGCTCCCTGCTGTAGTGTCATA
ACAGGACCCTCCCTCAGAAGAAGGAGGGAGATTTAGAGTGTCAGTCCTAT
CCCTTTGCGTGGTATTGTTAAACATTGGAGACTTGCAGGAGAAGTCCGTG
AAAGCTGCATTCCCCCTCTCAGTGACATGACCAAGGAAATGAACATAGGC
AAGGAATTCATTTCCACAGTCTTCCACAAACATCTCATGATTCGAAATAC
CTTGACATTTCTCTCACCAACAGTAATCCCATTCCCTTCCTCTCACATAG
GGGCTGACCTTAGAGACTCACTCACATAAGCAGGATGCAATAGAAACACC
CTGCATGGCTTCTGAGTTAGGCTCANAAACATAGCACAGGCTGTTAGAGA
AACCTATGCACCAATGCTGTGAGGAAACCCAGCCACTCAGAGTAGGCGTG
TGGAGATATTTTAGCTGCCGTTCTATCTAAGGTAAGTGCTTTAGTTCTAC
GCTTGTTAATCCTACCTATGGAATCCTGTTCTTGTACCCCTTG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAACCAAGGAAAGCCTAAGTCGTTAT
TAAAATCTTTCTAGAAGCTAAATACCAGGGGCCGAGCAGAGGAGAGGACG
AACTGTTAGGAGCAGCAGGTGGGGATTCCATGGTTGTCTGTCCTTCCAGC
TCTTTCTCTTCATTTTCACTCTCCCAGTCACAGAACACTAAACCAGATAA
GAGATGGCTCAGGAACTGAGGACTGGCTGCTCTTCCAGAGGACCTGAGTT
TAGTTACCAAAATACTTTTGATGCTCACAACCATCTGTAACTCTGGTTCC
TGGAAATCTGACACCCTCTTCTGACCTCATGAGCACCAAGCAAGTATATG
GTTAATATATATACATGCAGGCAAAACATTTATACACAAACTAAAATAAA
ATCTAAAATTAAATTACATAAAGATAGTGGTACACACATAGTGAAGCATC
ATTTTAAAATAAACGAACAAAGTTAAAGTTGAGTGGAAAGATAATGTTTT
TTAACTGTTCCACAGTTCACTTATGGAACCGCAGGTGATTAACAACGCAC
TACAATATAAGGCTGGGGGAGAAGAGCTCCTCCCTCCCTCCCAGGAGTCA
GCTGTGATAGGGATGCCTGGCACTTTTCCCAATAAACCATCTGCTGTTGG
GCCCGGGGGACCTAAGGGTGGATGATGGCTCTTGGAGCCTTGGAAAAATT

Query= MSMg01no365_m12.b1 MSMg01no365_m12.b1 CHROMAT_FILE:
MSMg01no365_m12.b1 PHD_FILE: MSMg01no365_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:22 2005
         (466 letters)



>mm_chr13_95405230_95406095
          Length = 866

 Score =  893 bits (462), Expect = 0.0
 Identities = 465/466 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatcattaaccaagctatttctaagttcgatttgaaaggcttgaatatgtcattaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcattaaccaagctatttctaagttcgatttgaaaggcttgaatatgtcattaatat 260

                                                                       
Query: 61  atttccccctgtactttctcttgattaaggtgcccgtgtctcagggctgctttccctctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttccccctgtactttctcttgattaaggtgcccgtgtctcagggctgctttccctctg 320

                                                                       
Query: 121 actctgactcttggctattctagctctcagttcttttcccctggctccctgctgtagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctgactcttggctattctagctctcagttcttttcccctggctccctgctgtagtgt 380

                                                                       
Query: 181 cataacaggaccctccctcagaagaaggagggagatttagagtgtcagtcctatcccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataacaggaccctccctcagaagaaggagggagatttagagtgtcagtcctatcccttt 440

                                                                       
Query: 241 gcgtggtattgttaaacattggagacttgcaggagaagtccgtgaaagctgcattccccc 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgtggtattgctaaacattggagacttgcaggagaagtccgtgaaagctgcattccccc 500

                                                                       
Query: 301 tctcagtgacatgaccaaggaaatgaacataggcaaggaattcatttccacagtcttcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcagtgacatgaccaaggaaatgaacataggcaaggaattcatttccacagtcttcca 560

                                                                       
Query: 361 caaacatctcatgattcgaaataccttgacatttctctcaccaacagtaatcccattccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaacatctcatgattcgaaataccttgacatttctctcaccaacagtaatcccattccc 620

                                                         
Query: 421 ttcctctcacataggggctgaccttagagactcactcacataagca 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcctctcacataggggctgaccttagagactcactcacataagca 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no365_m12.g1 MSMg01no365_m12.g1 CHROMAT_FILE:
MSMg01no365_m12.g1 PHD_FILE: MSMg01no365_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:22 2005
         (279 letters)



>mm_chr13_95571900_95572578
          Length = 679

 Score =  524 bits (271), Expect = e-153
 Identities = 277/279 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctcacaaccatctgtaactctggttcctggaaatctgacaccctcttctgacctcat 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 610 atgctcacaaccatctgtaactctcgttcctggaaatctgacaccctcttctgacctcat 551

                                                                       
Query: 61  gagcaccaagcaagtatatggttaatatatatacatgcaggcaaaacatttatacacaaa 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 550 gagcaccaagcaagtatatggttaatatatatacatgtaggcaaaacatttatacacaaa 491

                                                                       
Query: 121 ctaaaataaaatctaaaattaaattacataaagatagtggtacacacatagtgaagcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctaaaataaaatctaaaattaaattacataaagatagtggtacacacatagtgaagcatc 431

                                                                       
Query: 181 attttaaaataaacgaacaaagttaaagttgagtggaaagataatgttttttaactgttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attttaaaataaacgaacaaagttaaagttgagtggaaagataatgttttttaactgttc 371

                                                  
Query: 241 cacagttcacttatggaaccgcaggtgattaacaacgca 279
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cacagttcacttatggaaccgcaggtgattaacaacgca 332


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space:   180900
Effective search space used:   180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)