Query= MSMg01no367_d21.b1 MSMg01no367_d21.b1 CHROMAT_FILE:
MSMg01no367_d21.b1 PHD_FILE: MSMg01no367_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:20 2005
(485 letters)
>mm_chr13_21879768_21880650
Length = 883
Score = 903 bits (467), Expect = 0.0
Identities = 477/481 (99%), Gaps = 2/481 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgaagtcacgttaacctctgagatcgagggctgatctctctctgtcctgagt 64
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattctctgaagtcaggttaacctctgagatcgagggctgatctctct--gtcctgagt 262
Query: 65 acttaggttaagttcctgcacccacactgtcattaacaattgtttctaattagtatccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acttaggttaagttcctgcacccacactgtcattaacaattgtttctaattagtatccca 322
Query: 125 gaatctatgaggatttcttagtttaaatttagcctgtcttgttaagtgctaccacctaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaatctatgaggatttcttagtttaaatttagcctgtcttgttaagtgctaccacctaat 382
Query: 185 gtttcaaatctgcttttgaactcctgctgagacgtcacaatagattctgttcaataagat 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtctcaaatctgcttttgaactcctgctgagacgtcacaatagattctgttcaataagat 442
Query: 245 acctcattggagccccgaggtctacatgattctcgctgaaaacttgagatgtagtcaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acctcattggagccccgaggtctacatgattctcgctgaaaacttgagatgtagtcaggc 502
Query: 305 gcagcttaatttgattgggtcctgttttcttggtcgtttggtttgaagttttgttttcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcagcttaatttgattgggtcctgttttcttggtcgtttggtttgaagttttgttttcag 562
Query: 365 aatgaatttcactggttagcagtatattctcaaactaattctagccaggctaacctccag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatgaatttcactggttagcagtatattctcaaactaattctagccaggctaacctccag 622
Query: 425 attggacattcggcctcagtttcataaatcgctggaattacaggcctatacaaccagact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attggacattcggcctcagtttcataaatcgctggaattacaggcctatacaaccagact 682
Query: 485 t 485
|
Sbjct: 683 t 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 883
Length adjustment: 10
Effective length of query: 475
Effective length of database: 873
Effective search space: 414675
Effective search space used: 414675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_d21.g1 MSMg01no367_d21.g1 CHROMAT_FILE:
MSMg01no367_d21.g1 PHD_FILE: MSMg01no367_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:20 2005
(452 letters)
>mm_chr13_22073858_22074709
Length = 852
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Minus
Query: 1 cctcatctctggaatggagtctccggctgtcccggttgtagattctgtggtttggttgct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 652 cctcatctctggaatggagtctccggctgtcccggttgtagcttctgtggtttggttgct 593
Query: 61 cggcacagcttgcccctctaatgttgggtcctcttcagtgacaacaggaccttgctggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cggcacagcttgcccctctaatgttgggtcctcttcagtgacaacaggaccttgctggca 533
Query: 121 aggtatagttagcaggtccctaggaccagactgcagtagaggaatctctccatttagctg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 532 aggtatagttagcaggtccctagggccagactgcagtagaggaatctctccatttagctg 473
Query: 181 tccagagctgctgggtgtgactgagaggtgagaattaggactctctcctgcttttttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tccagagctgctgggtgtgactgagaggtgagaattaggactctctcctgcttttttcaa 413
Query: 241 tggccattctggagtctggactaatgttctgagaaaatgtctcttccaagatcctgagag 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 412 tggccattctggagtctggactaatgtcctgagaaaatgtctcttccaagatcctgagag 353
Query: 301 ctctctagaagaactgtaagaactggtaatagcatttctttttgtgctgggggggccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctctctagaagaactgtaagaactggtaatagcatttctttttgtgctgggggggccttg 293
Query: 361 ggtatgtatgctggccacaagggccccagagaagcaaccggatctcttccatttatcatc 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 292 ggtatgtatgctggccacaagggccccagagaagcaaccggatctcttacatttatcatc 233
Query: 421 tgagctctggacatggggtctccttttcagag 452
||||||||||||||||||||||||||||||||
Sbjct: 232 tgagctctggacatggggtctccttttcagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
