Query= MSMg01no371_a17.b1 MSMg01no371_a17.b1 CHROMAT_FILE:
MSMg01no371_a17.b1 PHD_FILE: MSMg01no371_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:18 2005
(527 letters)
>mm_chr13_42417697_42418623
Length = 927
Score = 967 bits (500), Expect = 0.0
Identities = 518/528 (98%), Gaps = 8/528 (1%)
Strand = Plus / Plus
Query: 1 tgaccttctactgcctggtgtaggtgcagggaacatggatatactaattttgtacttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaccttctactgcctggtgtaggtgcagggaacatggatatactaattttgtacttttc 260
Query: 61 agttatatgttaagttatatgttcttttttgtacttcatgtgttaggcttcaagaaaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttatatgttaagttatatgttcttttttgtacttcatgtgttaggcttcaagaaaggt 320
Query: 121 cacctctagacacacacacacacacacacacacacacacacacacac-ctgtttatttat 179
||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 321 cacctctagacacacacacacacacacacacacacaccc-------ctctgtttatttat 373
Query: 180 ttatttatttttaactaaataaatactgaagaagaagaatttgatggactgccaggactt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttatttatttttaactaaataaatactgaagaagaagaatttgatggactgccaggactt 433
Query: 240 tagcttgcctgggagctgtgtgtcttggtcaggctggggccttggaagttcctgttaagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tagcttgcctgggagctgtgtgtcttggtcaggctggggccttggaagttcctgttaagt 493
Query: 300 ctgaattcacttcactgcccatggctttgcttttcttctcaagtaaaggcctctccagcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctgaattcacttcactgcccatggctttgcttttcttctcaagtaaaggcctctccagcc 553
Query: 360 ttttccttgggcaaagctcatactgcgctgtgtgtcagaagctctctctagcaccacacg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttttccttgggcaaagctcatactgcgctgtgtgtcagaagctctctctagcaccacacg 613
Query: 420 ggtcggtcctaccttagatttgtttcctcagacgcgttccctggctttgtcaggtcttga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggtcggtcctaccttagatttgtttcctcagacgcgttccctggctttgtcaggtcttga 673
Query: 480 caccatcccaaagctggtaaaatgagccaagtgacttcatctctcatg 527
| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cgccatcccaaagctggtaaaatgagccaagtgacttcatctctcatg 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_a17.g1 MSMg01no371_a17.g1 CHROMAT_FILE:
MSMg01no371_a17.g1 PHD_FILE: MSMg01no371_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:18 2005
(529 letters)
>mm_chr13_42562778_42563706
Length = 929
Score = 986 bits (510), Expect = 0.0
Identities = 522/526 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcttttcatctggcattgaacttttatagccaattatccttgtattctcagcc 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 563 ggaattctcttttcatctggcattgaacttttatagcctattatccttgtattctcagcc 504
Query: 64 aggtaaatggtttctgccaaaggtgtggaatgccttctgcctggaggggaattcatattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggtaaatggtttctgccaaaggtgtggaatgccttctgcctggaggggaattcatattt 444
Query: 124 cgaagtcattcctagagagataagagaaagttcctttcggagctctgggttcaaatacca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cgaagtcattcctagagagataagagaaagttcctttcggagctctgggttcaaatacca 384
Query: 184 agtacatgtcttcataggtaccagtgttggacccgttttgaactacattttcagtggtgc 243
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 383 agtgcatgtcttcataggtaccagtgttggacccgctttgaactacattttcagtggtgc 324
Query: 244 atcagaaagaatctctaggctgcagagccaaatggaagcaagagcattccacagtttctg 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 323 atcagaaagaatctctaggctgcagagccaaatggaagcaagagcatttcacagtttctg 264
Query: 304 tttaaaatgttatctatttatttactttgtgtggtgagatatggccacaagtgatagggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttaaaatgttatctatttatttactttgtgtggtgagatatggccacaagtgatagggt 204
Query: 364 cacgtgtgcagaggtgaagggacaacttgaaggattaaagtcttccctttttaccatgtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cacgtgtgcagaggtgaagggacaacttgaaggattaaagtcttccctttttaccatgtg 144
Query: 424 gctcctagactcaggacatgggcttggcagcaaatgtcttaacccattgagctctctcac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gctcctagactcaggacatgggcttggcagcaaatgtcttaacccattgagctctctcac 84
Query: 484 tggttccttaaacactttctgtcttcgcatcattagaagtgattaa 529
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tggttccttaaacactttctgtcttcgcatcattagaagtgattaa 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
