Query= MSMg01no371_j18.b1 MSMg01no371_j18.b1 CHROMAT_FILE:
MSMg01no371_j18.b1 PHD_FILE: MSMg01no371_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:07 2005
(409 letters)
>mm_chr13_97455335_97456147
Length = 813
Score = 741 bits (383), Expect = 0.0
Identities = 404/413 (97%), Gaps = 4/413 (0%)
Strand = Plus / Minus
Query: 1 attttggttgcaataaatactacaatttctcagagctaggaatttaccgctttgatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attttggttgcaataaatactacaatttctcagagctaggaatttaccgctttgatattg 554
Query: 61 ctttatcattgaccgtggatgcctatgaaattaagccagccaggaggtactaaatttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctttatcattgaccgtggatgcctatgaaattaagccagccaggaggtactaaatttcga 494
Query: 121 actttacccatagctaactgcaaacaggttctaagcaaggaatcaggaccggatgaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 actttacccatagctaactgcaaacaggttctaagcaaggaatcaggaccggatgaaaca 434
Query: 181 tttcttggtaaacacttgcaaaactcactgcggggaagaaatgggagaaaataactttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttcttggtaaacacttgcaaaactcactgcggggaagaaatgggagaaaataactttga 374
Query: 241 aaacaaccagtcaagatgggatttttacccccaaagcaaggcaagaagtagaaacagtgt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaacaaccagtcgagatgggatttttacccccaaagcaaggcaagaagtagaaacagtgt 314
Query: 301 ttag----tgattaactttgggtcgtagctgttccagagactgttagtgggttcgtttaa 356
|||| |||||| ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 313 ttagtgattgattagctttgggtcgtagctgttccagaaactgttagtgggttcatttaa 254
Query: 357 ggtgcgtgatccccgtgtctctaatctggtctgcttccgtgagtagccctgtc 409
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggtgcgtgatccccgtgtctctaatctggtctgcttccgtgagcagccctgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 813
Length adjustment: 9
Effective length of query: 400
Effective length of database: 804
Effective search space: 321600
Effective search space used: 321600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_j18.g1 MSMg01no371_j18.g1 CHROMAT_FILE:
MSMg01no371_j18.g1 PHD_FILE: MSMg01no371_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:07 2005
(476 letters)
>mm_chr13_97286637_97287512
Length = 876
Score = 851 bits (440), Expect = 0.0
Identities = 464/472 (98%)
Strand = Plus / Plus
Query: 5 gaattcaccttttcccttcagtttccttatgtgtaaaggatgtttccccagcatgcacga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccttttcccatcagtttccttatgtgtaaaggatgtttccccagcatgcacga 264
Query: 65 ggccctaaatacacgacgcatgcatgcaagtgcgcgtgcatgcacacacccacacaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggccctaaatacacgacgcatgcatgcaagtgcgcgtgcatgcacacacccacacaagtg 324
Query: 125 tgcacacccccctaaatcatgtaattcttgtgagacggtactacatagaagcaatctgag 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcacacccccctaagtcatgtaattcttgtgagacggtactacatagaagcaatctgag 384
Query: 185 ttaagatctgcattagagcccaaaccagagcaaggcagccccatgcagtctgtcgatgca 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 ttaagatctgcattagagcccaaaccagagcaaggcagccccatgcagtctgtcgacgct 444
Query: 245 gcacatccaggtctcagcaatgagctcctcagtgtctccttgacttgtctcttttcagag 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcacatccaggtctcagcaacgagctcctcagtgtctccttgacttgtctcttttcagag 504
Query: 305 ctttatttagtattaaatcataaacagatacgccagggaaccaactctcaatggttccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttatttagtattaaatcataaacagatacgccagggaaccaactctcaatggttccac 564
Query: 365 tactgaacacaaggggctttcaatttatcaggttgcagacactgagctatttctacattt 424
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 cactgaacacaaggggctgtcaatttatcaggttgcagacactgagctatttctacgttt 624
Query: 425 ggctatcatgaaaatgctagtatagagatttataaacagttttgcttggata 476
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggctatcatgaaaatgctagtatagagatttataaacagttttgcttggata 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
