Query= MSMg01no371_j21.b1 MSMg01no371_j21.b1 CHROMAT_FILE:
MSMg01no371_j21.b1 PHD_FILE: MSMg01no371_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:08 2005
(406 letters)
>mm_chr13_23276314_23277119
Length = 806
Score = 777 bits (402), Expect = 0.0
Identities = 405/406 (99%)
Strand = Plus / Plus
Query: 1 atgaagcagccatggacacatgtaatgttgcagatgaggtcccagaaactcctcctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atgaagcagccatggacacatgtaatgttgcagatgaggtcccagaagctcctcctttcc 260
Query: 61 ctgtggactctgggatgctgtgtgtgctctagcaggtgagtttggtgatgactattcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtggactctgggatgctgtgtgtgctctagcaggtgagtttggtgatgactattcaaa 320
Query: 121 tctaaacttttaaagaagatttttacttcactagcacttcactacactagcaaaatgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaacttttaaagaagatttttacttcactagcacttcactacactagcaaaatgact 380
Query: 181 tgttcaaatgtgtgtgtgtatatgtgtctgtgtctgtgtgtgtctttgtgtgtctgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttcaaatgtgtgtgtgtatatgtgtctgtgtctgtgtgtgtctttgtgtgtctgtgtg 440
Query: 241 aatatacagtgtccttgttaactctcagcatagttgaattgaactccaaatttccccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatacagtgtccttgttaactctcagcatagttgaattgaactccaaatttccccaac 500
Query: 301 caaaatttcttcttctctttctcattgtatttcatcatatttccctactcaattcccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaatttcttcttctctttctcattgtatttcatcatatttccctactcaattcccaaa 560
Query: 361 gcccgaggctcacgctgaacctgttctccttccccacatcacacac 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcccgaggctcacgctgaacctgttctccttccccacatcacacac 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_j21.g1 MSMg01no371_j21.g1 CHROMAT_FILE:
MSMg01no371_j21.g1 PHD_FILE: MSMg01no371_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:08 2005
(401 letters)
>mm_chr13_23459679_23460480
Length = 802
Score = 745 bits (385), Expect = 0.0
Identities = 394/397 (99%), Gaps = 1/397 (0%)
Strand = Plus / Minus
Query: 6 gaattcttgttattttgtgtagagcaggtcagaaagaaacggcttcttgaaggaggaacg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaattcttgttattttgtgtagagcaggtcagaaagaaacggcttcttgaaggaggaacg 543
Query: 66 gaaacattagaatgagcaaaattttgctgaaggatgatgtcaggattggagagtgcatgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaaacattagaatgagcaaaattttgctgaaggatgatgtcaggattggagagtgcatgg 483
Query: 126 gacattatttaaatggcctactgttaaaaggaaaaatgtaagctttgcagtcatgctcat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gacattatttaaatggcctactgttaaaaggaaaaatgtaagctttgcagtcatgctcat 423
Query: 186 tcaacattgctgcttttttcctctaggagagggaagaattagatattatgagtacttctg 245
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 422 tcaacattgctgcttttttcctctaggagagggaagaattaaatattatgagtacttctg 363
Query: 246 gattagagaccttgtggatctg-aaaaaataaatcgttgtgttcttgttaaggtaagtgg 304
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 362 gattagagaccttgtggatctgaaaaaaataaatcgttgggttcttgttaaggtaagtgg 303
Query: 305 catacatctgtttctatataaatgtgaattttggagtagggatgggacaagaaagaaggt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catacatctgtttctatataaatgtgaattttggagtagggatgggacaagaaagaaggt 243
Query: 365 aaaacatacttgggaaaaggaaaagggtctttctggt 401
|||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaaacatacttgggaaaaggaaaagggtctttctggt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 802
Length adjustment: 9
Effective length of query: 392
Effective length of database: 793
Effective search space: 310856
Effective search space used: 310856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
