XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGT
CAGTATTCCTGCATAGAGTAGGGAGAGGCTTTCATGCCCTCACTCTTAAC
TGAAAAGCTGTTAACAGTTAATGGCTTCCCAAGGATGGAGAATCAGTTTA
AGAATGTGGCCCCATGCATGGGGAGAAAATGGTACATATCATTATGTCAA
CACTGAGGGTGGGGTCGTGAATCTTTGTTGGTTGGGGCTAGCCTGTTCTT
CATAGAGATTTCCAGACCAGCCAGAATATGTAATTAGACTCTGTTTCAAA
ACAAAAGAAGAGTTTGGATGCTGGACACTCTACCGTACCCCAATAGATGG
CCTCACAAACCTGAGTATAAGCAGCATGATTTTACTTTATGAGTTTATTA
AAAATAAAAACGACATAAATTTGGAAGGGTGAGGAGTTTGAATGGAACTA
CAAGGAGGGGTATAGATGAATATGAGGAATATGAATGACTAACATTGAAA
ACACCATGGGACTTCAAATTCTAATAATTCAAACATTGAGTTAAGAATAC
ATTTTAGTTAGTCATGAAAATGGTACACTTCCATATGGTCTAGTCATTTC
TACTACCATAAGCTTCTGTCAGAGTTGTAATATAACAACTATCTTATAAT
TATTTTATTACTGACAATGGAACTAGCAGAAGGCCCAGACCGGGGCAAGG
GATTCAGCAGGTACCATACTGTGATAGGAACAAGTTTCACAGATTACATC
A

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACTTCTGTGGGGCATTGAGCTCTGCAGACAGGCT
GGTATCCCGTTGAGCTGAGGTCTGAACCCCGATGGTCATAATTCACCTTC
ATGACATGGTAGGCTTTCCCTTATGCTCCTTGAACTCTGGCCCCTGCTTA
AGTTACCGCCCCCCACAGCCCCCACAAGAGAAGCATGGTCAGTAGTCATG
TAGGCAATGGCCCAAGCTTCTGACTTGCAGGCTAAACTCCTCCCTAGTTA
CCTAGCAACAGTAAAGACCATTAAAAAGGGCAGTTCAGCCCCTGCTTGCT
CTCTCACTCCTTTGTTCGCTTACCTCTCTCTTCTCTCACTTCTCTTTCCT
CTTCCCTTTTCCTTTCCCTTTCCCTTTCCCTTTCTCTTTCTCTTTCTCTT
TCCCCCTCCTCCTCCTCTCCTCTCCTCCTCCTCCTCTCCTCTCCTCTCCT
CTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCT
CTCNTNNTCTCTCCTCTCCTCTCCTTCCCTTTTCCTCNNTTTTTTTCTTT
TTTTTCTCTTTTCCTTTCTNNTCCCCTCCTTTCCCCTTTTCCTTTTTTTT
CCTTTTTTTCTCCTNNNNNNCTCTTTTTCCCCCTTNTCCCCCCTCCCCCT
TCTTTTTCTCTTTTTTCTTCCCCCTTCTTTTTCCCCCCCCCCCTCCTTTT
TTTTTCTTTTCTCCCTCTCTTCCCTTTCTTT

Query= MSMg01no372_n17.b1 MSMg01no372_n17.b1 CHROMAT_FILE:
MSMg01no372_n17.b1 PHD_FILE: MSMg01no372_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:42 2005
         (645 letters)



>mm_chr13_88943791_88944835
          Length = 1045

 Score = 1201 bits (621), Expect = 0.0
 Identities = 639/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctgcatagagtagggagaggctttcatgccctcactcttaactgaaaagctgttaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tcctgcatagagtagggagaggctttcatgccctcactcttaactgaaacgctgttaaca 260

                                                                       
Query: 61  gttaatggcttcccaaggatggagaatcagtttaagaatgtggccccatgcatggggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaatggcttcccaaggatggagaatcagtttaagaatgtggccccatgcatggggaga 320

                                                                       
Query: 121 aaatggtacatatcattatgtcaacactgagggtggggtcgtgaatctttgttggttggg 180
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatgatacatatcattatgtcaacactgagggtggggtcgtgaatctttgttggttggg 380

                                                                       
Query: 181 gctagcctgttcttcatagagatttccagaccagccagaatatgtaattagactctgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctagcctgttcttcatagagatttccagaccagccagaatatgtaattagactctgttt 440

                                                                       
Query: 241 caaaacaaaagaagagtttggatgctggacactctaccgtaccccaatagatggcctcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 441 caaaacaaaagaagagtttggatgctggacactctaccgtaccccaatagatggcctcat 500

                                                                       
Query: 301 aaacctgagtataagcagcatgattttactttatgagtttattaaaaataaaaacgacat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacctgagtataagcagcatgattttactttatgagtttattaaaaataaaaacgacat 560

                                                                       
Query: 361 aaatttggaagggtgaggagtttgaatggaactacaaggaggggtatagatgaatatgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatttggaagggtgaggagtttgaatggaactacaaggaggggtatagatgaatatgag 620

                                                                       
Query: 421 gaatatgaatgactaacattgaaaacaccatgggacttcaaattctaataattcaaacat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatatgaatgactaacattgaaaacaccatgggacttcaaattctaataattcaaacat 680

                                                                       
Query: 481 tgagttaagaatacattttagttagtcatgaaaatggtacacttccatatggtctagtca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagttaagaatacattttagttagtcatgaaaatggtacacttccatatggtctagtca 740

                                                                       
Query: 541 tttctactaccataagcttctgtcagagttgtaatataacaactatcttataattatttt 600
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttctactacaataagcttctgtcagagttgtaatataacaactatcttataattatttt 800

                                                        
Query: 601 attactgacaatggaactagcagaaggcccagaccggggcaaggg 645
           |||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 801 attactgacaatagaactagcagaaggccaagaccggggcaaggg 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)