Query= MSMg01no373_b15.b1 MSMg01no373_b15.b1 CHROMAT_FILE:
MSMg01no373_b15.b1 PHD_FILE: MSMg01no373_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:59 2005
(559 letters)
>mm_chr13_51136680_51137637
Length = 958
Score = 810 bits (419), Expect = 0.0
Identities = 437/443 (98%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 8 gaattcagcaggtctgcgcataatgtggtctgtttcctagttgccgtggttcagaggaat 67
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaattcagcaggtctgggcataatgtggtctgtttcctagttgccgtggttcagaggaat 383
Query: 68 gcaaaaagtccttataaactgagtcccatgagacagcagttcctgcttgagagtgatctc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcaaaaagtccttataaactgagtcccatgagacagcagttcctgcttgagagtgatctc 323
Query: 128 atcataggtatcgtatctgtaggattctggaatccaaggtgtccacaggcttaggacaaa 187
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcataggtatcgta-ctgtaggattctggaatccaaggtgtccacaggcttaggacaaa 264
Query: 188 gacttcagatactcaagtgccttttggaggtgtgaaaagggtgttgtaaaagccagtata 247
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 263 gacttcagacactcaagtgccttttgggggtgtgaaaagggtgttgtaaaagccagtata 204
Query: 248 actggcctgcagaccttagtcgtcctacagataatatctcaattgacttcatgatggaag 307
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 203 actggcctgcagaccttagtcgtcctacagataatagcacaattgacttcatgatggaag 144
Query: 308 taccattcagggcataaaacccagcatgtagacagcagcacccaccaaagtgaaaacaaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 taccattcagggcataaaacccagcatgtagacagcagcacccaccaaagtgaaaacaaa 84
Query: 368 ggcctaatccatcaacgtcaatagttctgggaaagtccctgaaagtacagccttgccttt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggcctaatccatcaacgtcaatagttctgggaaagtccctgaaagtacagccttgccttt 24
Query: 428 tagctgctgaagttatgcttttg 450
|||||||||||||||||||||||
Sbjct: 23 tagctgctgaagttatgcttttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space: 520452
Effective search space used: 520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_b15.g1 MSMg01no373_b15.g1 CHROMAT_FILE:
MSMg01no373_b15.g1 PHD_FILE: MSMg01no373_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:00 2005
(531 letters)
>mm_chr13_49987517_49988447
Length = 931
Score = 953 bits (493), Expect = 0.0
Identities = 522/532 (98%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 1 ctgttttcagaccaaggggaaaaacaatctgaataaagctagctgttgcatttatttgcc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ctgttttcagacccaggggaaaaacaatctgaataaagctagctgttgcatttatttgcc 774
Query: 61 agcctatgcatttattcagtctctgt-attgtccattgtttgcctctgcaccaaaattat 119
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 773 agcctatgcatttattcagtctctgtaattgtccgttgtttgcctctgcaccaaaattat 714
Query: 120 tagtctccagcaaactaacaactttttgcttccagaatagggcctatggaagagctgttc 179
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 713 tagtctacagcaaactaacaactttttgcttccagaatagggcctatggaaaagctgttc 654
Query: 180 ctaatactgataaagggatacaggcatatcttcaaactgaaaccaatccccactaaaaag 239
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 653 ctaatactgataaagggatacaggcatatcttcaaactaaaaccaacccccactaaaaag 594
Query: 240 gactgaattgtaaaggcaatacaggttctaattaagcaaccattagccagcagatgggca 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gactgaattggaaaggcaatacaggttctaattaagcaaccattagccagcagatgggca 534
Query: 300 ccttttcctgggactccctacccacgaaagctatcaggtcagcctccatcattcctgagc 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 533 ccttttcctgggactccctacccacgaaagctatcaggtaagcctccatcattcctgagc 474
Query: 360 attgtcagatgctcaagctccatgaggaggcacagaattaacacaaggcaacaaatgtgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 attgtcagatgctcaagctccatgaggaggcacagaattaacacaaggcaacaaatgtgg 414
Query: 420 gagaacaagaagcaaccctgtcctcagattcctcccatgcaggaaactgaccctgcttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gagaacaagaagcaaccctgtcctcagattcctcccatgcaggaaactgaccctgcttca 354
Query: 480 gggacatttcccaacaaacagtgatcatgttttcnaaaccaggcatcacctc 531
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 353 gggacatttcccaacaaacagtgatcatgttttcaaaaccaggcatcacctc 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
