NCCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGCCGGCGAGATACTAGCTCAGGCAAGAGACCATAATAAAGCCC
TTTGCCCTGATCTTCCCTCATAGGCATTGACATCCAAGCTCCAAGAGCAC
TATGACCCAAAATGATTAGTCTGGACTCTTTACTGCACCCCGACCCATCA
GCTAATGAACCACAAAACCTCTGAGAGACTCTGACCCGACTTTCAATTCC
CTTCATCTATGAGACACTTAGGAATTTCCCTGTATTTCTTGAAAGCAGTG
CTATGCATTTAAAAGGATGATTGTTATAATTCATGCTACAGTTCTTGGAA
TTTGCAGTGTCAGGATAGGAAGTCTAGATTCAGACAATACAAACGTTTTC
CAGAACCATTTTGTCTTAGATGGGTGTTCTATTGCTGGGAAGAAACACTA
TAACCATGGTAACTCTTACTAAGGAAAACATTTAACTGGGGACTGGCTTA
CAGTCCAGAGGTTCAGTCCTTTGTTGTCATGGTGAGAAGCATGGTGGCAT
GCAGGCAGACGTGGTGCTGGAGAAATGGCTGAGAGTTCTAAATCTGGATC
CACAGGCAACAACTAAAGTGATTAAGACACTTCCTCTAATGAGGCCACAC
CTACTCCAGCAAGGGCACACCTTCTAATAGTGCAAATCCCTATGGGTCTG
TGGGGGCCATTTTTATTTAAACACCAAACATTTCTTGATT

ATATATTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGAGCTCCTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGAGATAT
GTGCATAGGAGAGTAAGGGAGCGTGGGTGTGGTGGTCAGAGAATGACTTT
TGGGATTGGGTTCTGTCCCTTCATTCTGATTCCTTGGACCAGACTCAGAT
GGCCTGGCTTTTGCATGAAGGGTTTTGCCCACTGAGCCATCTCACTGACC
CTGGAATTATTTTAATGTTGAAATTTATAGTAGCTAACAGCTTTGAGCAT
AATGTGGATATTTTATGTTCCTTATAAAGGCTTATTCTATGTTAATACAA
ATATTTTTAGGGTTTTGCCCCTTCCCCTATTATTTCTGTTTATTCGTATG
TTATTATGTCTTGACGTTTCTTGTTTTTACTGTTTTTTGCGTCTCTTCAA
TGTCTTTTTGCTTTTCTTCTCTTGTTCCCTTCTGATCTTCTACTTCCCTT
CTTGTCCCTTCTTTCCTCCCCGTTTCTCCTCCCTTCTCCTCCCGATCTTT
TACTTGATTTTTTTTCCCTTCTCCTCTCCTTCTCTCCTTTCATCTTTTTT
TACTTTTCACCTCTTTTTTTACCCTCGTTTCTTTTTTTTTTCCTCTTCTC
CCTTCCCTTTTCTTTTCTCCCTCTTATTCCCCTCCTCTCCACATCCACTC
ACCTTATTTTTTTTATCTTTAATCCTCTTACACTTTCCATCTT

Query= MSMg01no376_a07.b1 MSMg01no376_a07.b1 CHROMAT_FILE:
MSMg01no376_a07.b1 PHD_FILE: MSMg01no376_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:48 2005
         (593 letters)



>mm_chr13_112926480_112927472
          Length = 993

 Score = 1131 bits (585), Expect = 0.0
 Identities = 588/589 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgccggcgagatactagctcaggcaagagaccataataaagccctttgccctg 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgctggcgagatactagctcaggcaagagaccataataaagccctttgccctg 264

                                                                       
Query: 65  atcttccctcataggcattgacatccaagctccaagagcactatgacccaaaatgattag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcttccctcataggcattgacatccaagctccaagagcactatgacccaaaatgattag 324

                                                                       
Query: 125 tctggactctttactgcaccccgacccatcagctaatgaaccacaaaacctctgagagac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctggactctttactgcaccccgacccatcagctaatgaaccacaaaacctctgagagac 384

                                                                       
Query: 185 tctgacccgactttcaattcccttcatctatgagacacttaggaatttccctgtatttct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgacccgactttcaattcccttcatctatgagacacttaggaatttccctgtatttct 444

                                                                       
Query: 245 tgaaagcagtgctatgcatttaaaaggatgattgttataattcatgctacagttcttgga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaaagcagtgctatgcatttaaaaggatgattgttataattcatgctacagttcttgga 504

                                                                       
Query: 305 atttgcagtgtcaggataggaagtctagattcagacaatacaaacgttttccagaaccat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttgcagtgtcaggataggaagtctagattcagacaatacaaacgttttccagaaccat 564

                                                                       
Query: 365 tttgtcttagatgggtgttctattgctgggaagaaacactataaccatggtaactcttac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgtcttagatgggtgttctattgctgggaagaaacactataaccatggtaactcttac 624

                                                                       
Query: 425 taaggaaaacatttaactggggactggcttacagtccagaggttcagtcctttgttgtca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaggaaaacatttaactggggactggcttacagtccagaggttcagtcctttgttgtca 684

                                                                       
Query: 485 tggtgagaagcatggtggcatgcaggcagacgtggtgctggagaaatggctgagagttct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggtgagaagcatggtggcatgcaggcagacgtggtgctggagaaatggctgagagttct 744

                                                            
Query: 545 aaatctggatccacaggcaacaactaaagtgattaagacacttcctcta 593
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaatctggatccacaggcaacaactaaagtgattaagacacttcctcta 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)