Query= MSMg01no377_l03.b1 MSMg01no377_l03.b1 CHROMAT_FILE:
MSMg01no377_l03.b1 PHD_FILE: MSMg01no377_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:58 2005
(507 letters)
>mm_chr13_23318012_23318919
Length = 908
Score = 864 bits (447), Expect = 0.0
Identities = 486/499 (97%), Gaps = 3/499 (0%)
Strand = Plus / Plus
Query: 8 ttcactgacctacatatactaagttcactgacctacatatactaagttcactgacctaca 67
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcactgacctacatatacttagttcactgacctacatatactaagttcactgacctaca 267
Query: 68 tatactaagttcactgacctatatatactaagcagtttctttaaaaggaaacacttaatt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatactaagttcactgacctatatatactaagcagtttctttaaaaggaaacacttaatt 327
Query: 128 ctctttactgagcaacggaggatgagagggggtttggacctcagaatctcaactcctctg 187
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 328 ctctttactgagcaacggaggatgagagggggtttggacctcagactctcaactcctctg 387
Query: 188 ataccaaaaagattggaactaatctctcagctgtcgcctcacaaatgctgaagcgtctct 247
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 388 ataccaaaaagattggaactaatctctcagttgtcgcctcacaaatgttgaagcgtctct 447
Query: 248 atccccatgttcagcattagacacccctggggtaggtttccactgag-cttcatgttatg 306
||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||
Sbjct: 448 atccccatgttcagcattagacacccctgggataggtttccactgaggcttcatattatg 507
Query: 307 tctctaaaaagctttcagagttg-aagtacttttcagtgtgttaagaaaaactcttgaaa 365
|||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 508 tctctaaaaa-ctttaagagttggaagtatttttcagtgtgttaagaaaaactcttgaaa 566
Query: 366 ggcaaacctggtggcctgtgcctttaatcctagcacttaagagacaaaagcagatctctg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggcaaacctggtggcctgtgcctttaatcctagcacttaagagacaaaagcagatctctg 626
Query: 426 agttcaaagctaatggggtctacagagagaatttcaggacagcttggaaaacactgtctc 485
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 627 agttcaaagctaacggggtctacagagagaatttcaggacagctaggaaaacactgtctc 686
Query: 486 aagaaaataaaaagaaaga 504
|||||||||||||||||||
Sbjct: 687 aagaaaataaaaagaaaga 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_l03.g1 MSMg01no377_l03.g1 CHROMAT_FILE:
MSMg01no377_l03.g1 PHD_FILE: MSMg01no377_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:58 2005
(444 letters)
>mm_chr13_22041317_22042160
Length = 844
Score = 835 bits (432), Expect = 0.0
Identities = 441/444 (99%)
Strand = Plus / Plus
Query: 1 ttgatattttaggaatcagtgaccttcaaggatgtggtcgtgaacttcactcaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgatattttaggaatcagtgaccttcaaggatgtggtcgtgaacttcactcaggaagaa 260
Query: 61 tggaaacacctggatcctatacagagagatttgttcagagatgtgacactggaaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaacacctggatcctatacagagagatttgttcagagatgtgacactggaaaattat 320
Query: 121 acacatctggtctctataggtgagtgtggtgccctccccccaacttaaaatcaggatgta 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 acacatctggtctctataggtgagtgtggtgccctccccccaagttaaaatcaggatgta 380
Query: 181 ggaagagggtacacacctggtctctagcgaagggtgaccttaagtttgtttggttttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagagggtacacacctggtctctagcgaagggtgaccttaagtttgtttggttttggt 440
Query: 241 ttatatggtgtggcaaacacacaccttgtctttttaggtgaggatagctccaagtttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatatggtgtggcaaacacacaccttgtctttttaggtgaggatagctccaagtttaga 500
Query: 301 tgggatgtgggaggcacgttattgtgcttagatgtgattggcatctaaatttcgggacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggatgtgggaggcacgttattgtgcttagatgtgattggcatctaaatttcgggacca 560
Query: 361 gaaattttaaattttagaagtttctcctcattattaggtggagtattctcctctccttag 420
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gacattttaaattttagaagtttctcctcattattaagtggagtattctcctctccttag 620
Query: 421 atgagcttctcggttgccccattg 444
||||||||||||||||||||||||
Sbjct: 621 atgagcttctcggttgccccattg 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
