XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
ATTGTTGTATGAAGAGGTAAGCCTCTTTTCATATTTAGCACCATTATATT
TCTGTGTATTATGTATGTGAACTCTACTATTGTCCAATCATGCAGCACAT
GAGTATAGCTGTGCTCTGCCTTTGTGCGCTTGTGAGCCAAGATTAGTCTA
CACAACTGCAACCAAGTGTTTGTGTGAGATTCTTTTTCTTCATGAAAGTT
CCATTTGTTCCATGTCTCACAAAGACTTGCTCTAATGTGTTATTACTTTG
TATTTGTCTCTCATCTGACGATGCTGATTGCCTTTCCATATATCTGCTGA
ACGTTAGGATATCCCTCCATTTCATCTATTCTAAGGATTTTTGTCAGCAT
TTTAAAATTATGTGGTTGATAATATTTACATATGCATCTTTGAATATTTA
AAGATAAATGCATAGATATCTTTATACATTGAAATACAAAAGGCATTTAT
AGATATGAATATACTGCAACATTTGAGTATGTACCTTTGGTCATGAATAT
GTACTATGAAGGTCTTTTAGATGAAAAGATTTCTGTAGTTTTAGCTGCTT
TACTGTACTGATTAAATGGACAATTTTTAAAGCGATAATTTAAATGTACC
TATAAATGTGCTACCATGCGCGATTTTGATACATATTTCGCATGTGTAAT
GATTATATCAAATTATGCATAAGTACCTTTCTCAG

GATGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAATTCCCCAATAAAAAGACATAGACCAACA
GATTGGACACAACATTTTGCTGCATACAAGAAACCCATCTTAGTGACAAA
GACAGATATTGCCTAAGAGTAAAAGGCTGGAAAAGAATTCTGCTTGCAAA
TGGTGCCAAGAAAAAAGCTGGAGTAGCCAGTCTAATATCAAATTAAATAC
ACTTTCAACATAAAGATATAAAAAATATAAGGAAGAACACTTCAAACTCA
TCAAAGGAAAAATCTACCAAGATGAACTGTCAATTCTGGACATCTATGTT
CTTAATACAAGGACAAAAACATTCATAAAAGAAACGTTACTAAAGTACAA
AGCATACATTGTACCTCGAACAATAATGGTGGGAGGCTAAAACACCCTAC
TCTCATCAATAGACAGATCATGGAAACAAAAACTAAACAGAGACACAGTA
AAACTAACAGAAGTTCTGAACCAAATGGTTTAAACTGATATCTATAGAAC
ATTTTATTTTAAAACAAAAGATTATACCTTCTTCTTGGTATCTCATGGTG
CCTTCTCCAAAACTCACAAAATAATCTGTCACAAAACAGGCCTCAACAGA
TAAAAGAAGATTGGAATAATCCCATGCATCCTAACAGATCATCACATCAC
AGATTAANGCTGATCCTCTATAACAACATAAAAAATAGAGAGGCCN

Query= MSMg01no380_b24.b1 MSMg01no380_b24.b1 CHROMAT_FILE:
MSMg01no380_b24.b1 PHD_FILE: MSMg01no380_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:06 2005
         (449 letters)



>mm_chr13_80455241_80456089
          Length = 849

 Score =  779 bits (403), Expect = 0.0
 Identities = 430/439 (97%)
 Strand = Plus / Minus

                                                                       
Query: 11  cattgttgtatgaagaggtaagcctcttttcatatttagcaccattatatttctgtgtat 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 649 cattgttgtatgaagaggtaagcctcttttcatatttagcaccattatatttctgcgtat 590

                                                                       
Query: 71  tatgtatgtgaactctactattgtccaatcatgcagcacatgagtatagctgtgctctgc 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tatgtatgtgaactctactattgtccaatcatgcagcacatgagtatagctgtgctctgc 530

                                                                       
Query: 131 ctttgtgcgcttgtgagccaagattagtctacacaactgcaaccaagtgtttgtgtgaga 190
           |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 529 ctttgtgcgcttatgagccaagattagtctacacaattgcaaccaagtgtttgtgtgaga 470

                                                                       
Query: 191 ttctttttcttcatgaaagttccatttgttccatgtctcacaaagacttgctctaatgtg 250
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttctttttcttcatgaaagttgcatttgttccatgtctcacaaagacttgctctaatgtg 410

                                                                       
Query: 251 ttattactttgtatttgtctctcatctgacgatgctgattgcctttccatatatctgctg 310
           ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 409 ttattacttcgtatttgtctctcagctgacgatgctgattgcctttccatatatctgctg 350

                                                                       
Query: 311 aacgttaggatatccctccatttcatctattctaaggatttttgtcagcattttaaaatt 370
           |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 349 aacgttaggatatccctccatttcatctattctaagaatttttgtcagtattttaaaatt 290

                                                                       
Query: 371 atgtggttgataatatttacatatgcatctttgaatatttaaagataaatgcatagatat 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtggttgataatatttacatatgcatctttgaatatttaaagataaatgcatagatat 230

                              
Query: 431 ctttatacattgaaataca 449
           |||||||| ||||||||||
Sbjct: 229 ctttatactttgaaataca 211


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)