CCTGCCGCTAAACGACTCACTAATCCTAGAGAATCCGCGGAATTCTATAA
ATTTCCGGCCACCAATGTTGTCTCTTCTCTATTGTGTTTGAAGCCCCGGC
CTTTTCCTCCTTCCGTCTAATGATACACTTGGATGCTTAGACCCCTTAAA
GGTTGGGCCAGCTCTGTTTCTGAGCCACTGGAATGTTGGGCAAAGGGGAC
AGAAGCTGAAAGGACTCTAATCTACCACCTCCAGGCTGCAGAGACAGCAG
CAGACATAGCAGGGGTGTCCTGCTTTGAGCAAGGTACAGGGACGTGGCCC
CACCCATTCCTGCTCACAGTTCTGTCTTGGTCCTCTCAGTCCTTGTATGG
CTAGTTGGCCTAGGTCCTCAGTTCTTCCTGGAAGGACTGGTGTCCAGGCC
TTTCCCAGAATGGACTGTTTTCCTGATGACCCCATAGGACAACTTCTGTT
ATCAGCATGATTAGATTAAGAAGGGCCCAGGTGTTCATGGGCCGTACTTT
AGCCAATCTATGACAGCATTTTTAAAGAGGAGAGCTGAGGAGGGAAGACT
CTCCCTGACGCCATTCCACAGGGCCCGAGAAAGAATGTGCCCCCAACACT
TGCATTCCTTTTTTTTTTTAATTGGCCCTTCCTATCTACCTTTCACATGT
TTTCTTTCTTTTCACATTTCCCCTCTAATACCCCCGCCTTTCCCATCCCT
ATCCTTTCCTCATTCACCCTCTCCTTAACTCCTCCCCTTGCTCCTCTCTT
TCAACAACTCTCTTATTTATAATCCTTCCCTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCAGTCCTGACTTCCTTTGGTGATGAACAGCAGTGTG
GAAAGTGTAAGCTGAATAAACCCTTTCCTCTCCAACTTGCTTCTTGGTCA
TGGTGTTTTGTGCAGGAATAGAACCCCTGACTAAGACATCAGGTGAGCCC
ATTTTGTGTTGTGCTAAAATGCCTGACAAGAGGTGCTCTTTTGGCTCTTG
GCTCTAAAGACTCAGGAATCTACCTGGCTCTTGTGAGGGCCCTGTGCTCA
ATAGTGTTATTATGACAGTAGCTTGTGCAAAAGCAATCATGTAACAAGAA
CCCAGAGATAGGGGAGCAAGCTTGCTCTTGTTTACAACAACCTGTGTTCT
CTTAAAATACTGATTTAGTCTCACCAAAGCTAGACCTTCTGAGGGAGATT
ATCAACTCCATCAGGAGGGAGGGCCCTCTATGACCCAATTACCTACCATT
AGACGCCATATTTTAAAGTTAAAGCAAATCCAGGTGTACCAGTACATGTC
TATTTTTATAAAGAAAAGAAACAGTTTTGTGTATACATAGCTAAATTTGT
ATATGTATGTTCCTCGCGGCGTAAAGATGGCTTTAATACTGAATAATATT
ACGCATAAGATGCTAAATTATAACAAATGTCCTTTCCTCGCATACATTGT
CTCGTGAGGATAACATTTTTTTCTCTTGTCTTTTTGGTCCACCTCCCTCT
CCATTTTGTGTGTCTATCTACCCTCCTCTTTTCG

Query= MSMg01no380_f11.b1 MSMg01no380_f11.b1 CHROMAT_FILE:
MSMg01no380_f11.b1 PHD_FILE: MSMg01no380_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:23 2005
         (428 letters)



>mm_chr13_48389011_48389838
          Length = 828

 Score =  804 bits (416), Expect = 0.0
 Identities = 425/428 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaatgttgtctcttctctattgtgtttgaagccccggccttttcctccttccgtctaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaatgttgtctcttctctattgtgtttgaagccccggccttttcctccttccgtctaat 260

                                                                       
Query: 61  gatacacttggatgcttagaccccttaaaggttgggccagctctgtttctgagccactgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatacacttggatgcttagaccccttaaaggttgggccagctctgtttctgagccactgg 320

                                                                       
Query: 121 aatgttgggcaaaggggacagaagctgaaaggactctaatctaccacctccaggctgcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgttgggcaaaggggacagaagctgaaaggactctaatctaccacctccaggctgcag 380

                                                                       
Query: 181 agacagcagcagacatagcaggggtgtcctgctttgagcaaggtacagggacgtggcccc 240
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ggacagcagcagacatagcaggggtgtcctgctctgagcaaggtacagggacgtggcccc 440

                                                                       
Query: 241 acccattcctgctcacagttctgtcttggtcctctcagtccttgtatggctagttggcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccattcctgctcacagttctgtcttggtcctctcagtccttgtatggctagttggcct 500

                                                                       
Query: 301 aggtcctcagttcttcctggaaggactggtgtccaggcctttcccagaatggactgtttt 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggtcctcggttcttcctggaaggactggtgtccaggcctttcccagaatggactgtttt 560

                                                                       
Query: 361 cctgatgaccccataggacaacttctgttatcagcatgattagattaagaagggcccagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgatgaccccataggacaacttctgttatcagcatgattagattaagaagggcccagg 620

                   
Query: 421 tgttcatg 428
           ||||||||
Sbjct: 621 tgttcatg 628


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space:   343161
Effective search space used:   343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no380_f11.g1 MSMg01no380_f11.g1 CHROMAT_FILE:
MSMg01no380_f11.g1 PHD_FILE: MSMg01no380_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:23 2005
         (466 letters)



>mm_chr13_48518624_48519489
          Length = 866

 Score =  886 bits (458), Expect = 0.0
 Identities = 464/466 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtcctgacttcctttggtgatgaacagcagtgtggaaagtgtaagctgaataaaccct 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 790 cagtcctgacttcctttggtgatgaacagcagtgtgggaagtgtaagctgaataaaccct 731

                                                                       
Query: 61  ttcctctccaacttgcttcttggtcatggtgttttgtgcaggaatagaacccctgactaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttcctctccaacttgcttcttggtcatggtgttttgtgcaggaatagaacccctgactaa 671

                                                                       
Query: 121 gacatcaggtgagcccattttgtgttgtgctaaaatgcctgacaagaggtgctcttttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gacatcaggtgagcccattttgtgttgtgctaaaatgcctgacaagaggtgctcttttgg 611

                                                                       
Query: 181 ctcttggctctaaagactcaggaatctacctggctcttgtgagggccctgtgctcaatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcttggctctaaagactcaggaatctacctggctcttgtgagggccctgtgctcaatag 551

                                                                       
Query: 241 tgttattatgacagtagcttgtgcaaaagcaatcatgtaacaagaacccagagatagggg 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgttataatgacagtagcttgtgcaaaagcaatcatgtaacaagaacccagagatagggg 491

                                                                       
Query: 301 agcaagcttgctcttgtttacaacaacctgtgttctcttaaaatactgatttagtctcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agcaagcttgctcttgtttacaacaacctgtgttctcttaaaatactgatttagtctcac 431

                                                                       
Query: 361 caaagctagaccttctgagggagattatcaactccatcaggagggagggccctctatgac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaagctagaccttctgagggagattatcaactccatcaggagggagggccctctatgac 371

                                                         
Query: 421 ccaattacctaccattagacgccatattttaaagttaaagcaaatc 466
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccaattacctaccattagacgccatattttaaagttaaagcaaatc 325


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)