Query= MSMg01no381_c09.b1 MSMg01no381_c09.b1 CHROMAT_FILE:
MSMg01no381_c09.b1 PHD_FILE: MSMg01no381_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:27 2005
(569 letters)
>mm_chr13_84369183_84370147
Length = 965
Score = 710 bits (367), Expect = 0.0
Identities = 414/431 (96%), Gaps = 4/431 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttagtttccgaaagcattttctatcatacaagcatgtggcacacttacccat 63
|||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttagttactgaaagcgttttctatcatacaagcatgtggcacacttaccca- 262
Query: 64 tcttcttgccagggttctagctattgtctctctcctcctctttgcacttaggatgacttg 123
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 263 --ttcttgccagggttctagctattgtctc-ctcctcctctttgcacttatgatgacttg 319
Query: 124 gcttccaaatgagctataaaataactataatctctcagagaaacttgcctcccttccata 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 320 gcttccaaatgagctataaaataactgtaatctctcagagaaacttgcctcccttccata 379
Query: 184 agctcagtggacacaaagaccatttctccatgctacttctttatggtcactgactgttta 243
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 agctcagtggacacagagaccatttctccatgctacttctttatgatcactgactgttta 439
Query: 244 attagtacagattttttttagaggaaaaatggtttattttgataaagtatttgtcgtctc 303
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 attagtacagattttttttagaggaaaaatggaatattttgataaagtatttgtcgtctc 499
Query: 304 aaggtcatgctcaacaacatgcagttgagttacaagagacgtcacgctagaaaccatttg 363
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 500 aaggtcatgctcaacaacatgcagttgagttagaagagacatcacgttagaaaccatttg 559
Query: 364 aagtgcatttacagctttatgttgggccgcatccatagttatcctgcagtacatgccctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtgcatttacagctttatgttgggccgcatccatagttatcctgcagtacatgccctg 619
Query: 424 ggtggatagcc 434
||| |||||||
Sbjct: 620 ggttgatagcc 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 965
Length adjustment: 10
Effective length of query: 559
Effective length of database: 955
Effective search space: 533845
Effective search space used: 533845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_c09.g1 MSMg01no381_c09.g1 CHROMAT_FILE:
MSMg01no381_c09.g1 PHD_FILE: MSMg01no381_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:27 2005
(567 letters)
>mm_chr13_84497174_84498140
Length = 967
Score = 750 bits (388), Expect = 0.0
Identities = 427/454 (94%), Gaps = 24/454 (5%)
Strand = Plus / Minus
Query: 114 gaaagttgtcttctgacctcccactttgtgtacgtgcgcgcgcgcacgcgcgcgcacaca 173
|||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 904 gaaagttgtcttctgacctcccactttgtgta--------cgcg--ctcgcgcgcacaca 855
Query: 174 cacacacacacacaaacacacacacacacatgcacgcacaccataattaattaactaact 233
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 c--------------acacacacacacacatgcacgcacaccataattaattaactaact 809
Query: 234 aactaattcattcattctttataatgtaatcaattttttaaagtttacctaacttgtgtg 293
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aactaattcattcattcattagaatgtaatcaattttttaaagtttacctaacttgtgtg 749
Query: 294 acttggggaatctctttagattaacttaacaacacaattgtctctgtatcagcattttct 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 acttggggaatctctttagattaacttaacaacacaattgtctctgtatcagcattttct 689
Query: 354 attgaactaatcttagtagtcacacaataaatgcatatgtggtaaatagctagaaaaaat 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 attgaactaatcttagtagtcacacaataaatgcatatgtggtaaatagctagaaaaaat 629
Query: 414 tctcagttaaaaggcaaccttaatgaaggtatttagacagtcaaaatgtctgacaaaacc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tctcagttaaaaggcaaccttaatgaaggtatttagacagtcaaaatgtctgacaaaacc 569
Query: 474 tttcttatctttatttgtaatatccaccattaacatgcaaagctatttggctttattgca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tttcttatctttatttgtaatatccaccattaacatgcaaagctatttggctttattgca 509
Query: 534 ctccaaagttatgttccacagctgtgtttttgta 567
||||||||||||||||||||||||||||||||||
Sbjct: 508 ctccaaagttatgttccacagctgtgtttttgta 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
