XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATGCTG
ATCCGCTAAATGTAGCAGCGGACTGTCAAAAACTGTCAAGTGAAAGACTT
CTTGATTGGTGCATTCAGATTCAACGTGAATGTAGGCTAATAAGTGAAGC
CGGCTCTGAAGAACAAGCACACCATCTAAACCAAGAAGAAGAAGACAGTA
CATCTGCCAGTCAGGCTCGGTGGGCGGCGAATAGAAGATCGGGAAGGAAA
CCAATGCTAGTAATGAAATAAATATTAACCCACAAGGGTTTCTATGACAG
CCCATGACAACTGAAGCCGGTCTTCCTGGTGGCCCACATCACCCACACAC
TTGCCTTTTCAGGTCATGACATAAAGGCCAACTGAGCGCCAGGCATGAGA
CGGAAACAGTTGGTACCAGGGCACTGCCCTGCATAGCAATGGAGAACTTG
TTTTTCCTTGTTCTAGAACCCCACCACTCCTCCAAGTCGAATGGTGGGTT
CCCCCAAACCTACGCCTACATCCCAGAAGCTATGAATGTGCTCATATATT
GGAAAGAAACGCTCCTGCCAGCTGACTGATGATCCCCCAATAAGTTCTTC
CTGGCGAACCTATCCGGTGCCTTTGGAACCAGTAACTTATTTGGTCCCCG
AACGAAGGGCACTTCTCGCAAGGGAAGGGTTTTTTGTGGCCATCGCCCTC
AAAAACCACCGCCCTTTTCGCCGGGAATTAAACGAAAAATTTTACCCTCT
TTTTTCCTCC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTATCCCAGGTAGTTCCCGTTAGACCTTCCTCTG
TTTTATGTAAGATTCCGGTTACCTCATTTGTACCTTACAAATATGTCACC
CAACTTCCTTATTGTCTTCTGCATAAAAAGTCTGATGCTCGATTTAAAAA
ATACATTCAGATTCCACACGACCTCTCCTGTGTGCGTCTGTCTGTCAATT
CATCCTACGCTTTGTCCACCCTCGACTAGAAACCCGTTCCACGCAGACAG
ACACACAGAACATCCCCACGTGTTCCTTTCTTACCTGTTGAGGCTTTGCT
CATTCATAAATTGCTTCATTCATTTAAAAAAATTTTTTTCACTGTGTACA
GGACATCAGTTACTCTATTAAAAGTGAGCAAAGAAAACATCACTCTCTTT
ATAGAACTGAGATTTTGATAAAAGGAGCCTACNCAACAACNACAACTAGA
ATAATTACNAGAAAGGNAATCAGGTAATAAGGTAATGGGCAGTCTGTAAT
AAATTGCATAAAAAAGTTCCCCGGAGGGCTGGAGAAAGAACTCAACTTGT
TCTTTGAAAAGCTCAAAATTTGGTTTTCATTGCCCCCTGTTATTTAAAAA
CCCCCCCAAACCTTGGTTTCAAAAGAATTAAGCCCCCCTCTACCCTCCAA
AAACCCCACCACCTTTGGGGCCCGAATTTATTTCTAAAAAAACCCGAAAC
CCCTGTCCAAAAAAAATTTTTTTAAAATTAGATGCCCCCTACCAAAA

Query= MSMg01no381_j18.b1 MSMg01no381_j18.b1 CHROMAT_FILE:
MSMg01no381_j18.b1 PHD_FILE: MSMg01no381_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:05 2005
         (425 letters)



>mm_chr13_46014058_46014883
          Length = 826

 Score =  770 bits (398), Expect = 0.0
 Identities = 416/422 (98%), Gaps = 1/422 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgctgatccgctaaatgtagcagcggactgtcaaaaactgtcaagtgaaagac 64
           ||||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgctgaacagttaaacgtagcagcggactgtcaaaaactgtcaagtgaaagac 264

                                                                       
Query: 65  ttcttgattggtgcattcagattcaacgtgaatgtaggctaataagtgaagccggctctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcttgattggtgcattcagattcaacgtgaatgtaggctaataagtgaagccggctctg 324

                                                                       
Query: 125 aagaacaagcacaccatctaaaccaagaagaagaagacagtacatctgccagtcaggctc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagaacaagcacaccatctaaaccaagaagaagaagacagtacatctgccagtcaggctc 384

                                                                       
Query: 185 ggtgggcggcgaatagaagatcgggaaggaaaccaatgctagtaatgaaataaatattaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgggcggcgaatagaagatcgggaaggaaaccaatgctagtaatgaaataaatattaa 444

                                                                       
Query: 245 cccacaagggtttctatgacagcccatgacaactgaagccggtcttcctggtggcccaca 304
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accacaagggtttctatgacagcccatgacaactgaagccggtcttcctggtggcccaca 504

                                                                       
Query: 305 tcacccacacacttgccttttcaggtcatgacataaaggccaactgagcgccaggcatga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcacccacacacttgccttttcaggtcatgacataaaggccaactgagcgccaggcatga 564

                                                                       
Query: 365 gacggaaacagttggtaccagggcactgccctgcatagcaatggagaacttgttttt-cc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 gacggaaacagttggtaccagggcactgccctgcatagcaatggagaacttgttttttcc 624

             
Query: 424 tt 425
           ||
Sbjct: 625 tt 626


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space:   339872
Effective search space used:   339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)