MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-381L04
Chromosome	13 (Build37)
Map Location	95,676,722 - 95,677,199
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Arsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1, Tbca, Otp
Downstream gene	Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Arsb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cycs-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13066 MGI:109498
definition	note : cytochrome c, pseudogene 3 pseudo : _no_value

name	Lhfpl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218454 MGI:2145236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scamp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107767 MGI:1349480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	ENSMUSG00000042857 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328309 MGI:3641792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 50 ESTs

name	Ap3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11774 MGI:1333879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Otp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18420 MGI:99835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218461 MGI:2443999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbed3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72114 MGI:1919364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aggf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66549 MGI:1913799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crhbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12919 MGI:88497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100z (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268686 MGI:2685471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2rl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14063 MGI:101910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14062 MGI:101802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqgap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544963 MGI:2449975
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2rl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14064 MGI:1298208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arsb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656170 GeneID:11881 MGI:88075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arylsulfatase B transcript_id : NM_009712.3

name	Lhfpl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803108 GeneID:218454 MGI:2145236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like 2 transcript_id : NM_172589.2

name	Scamp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037394 GeneID:107767 MGI:1349480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretory carrier membrane protein 1 transcript_id : NM_029153.1

name	ENSMUSG00000042857 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264618 GeneID:328309 MGI:3641792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 50 ESTs product : predicted gene, ENSMUSG00000042857 transcript_id : XM_001472542.1

name	Ap3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106253 GeneID:11774 MGI:1333879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 3, beta 1 subunit transcript_id : NM_009680.2

name	Tbca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130449 GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin cofactor a transcript_id : NM_009321.2

name	Otp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368132 GeneID:18420 MGI:99835
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : orthopedia homolog (Drosophila) transcript_id : NM_011021.2

name	Wdr41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123702000 GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 41 transcript_id : NM_172590.2

name	Pde8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986552 GeneID:218461 MGI:2443999
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 8B transcript_id : NM_172263.1

name	Zbed3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354003 GeneID:72114 MGI:1919364
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, BED domain containing 3 transcript_id : NM_028106.2

name	Aggf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328274 GeneID:66549 MGI:1913799
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiogenic factor with G patch and FHA domains 1 transcript_id : NM_025630.2

name	Crhbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352317 GeneID:12919 MGI:88497
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone binding protein transcript_id : NM_198408.2

name	S100z (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487214 GeneID:268686 MGI:2685471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein, zeta transcript_id : NM_001081159.1

name	F2rl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349952 GeneID:14063 MGI:101910
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor-like 1 transcript_id : NM_007974.3

name	F2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892391 GeneID:14062 MGI:101802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor transcript_id : NM_010169.3

name	Iqgap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118344443 GeneID:544963 MGI:2449975
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif containing GTPase activating protein 2 transcript_id : NM_027711.1

name	F2rl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367856 GeneID:14064 MGI:1298208
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor-like 2 transcript_id : NM_010170.3

name	Arsb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656171 GeneID:11881 MGI:88075
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004065 - arylsulfatase activity [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003943 - N-acetylgalactosamine-4-sulfatase activity [Evidence IEA]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : arylsulfatase B structural; arylsulfatase B regulation; arylsulfatase B temporal regulation; arylsulfatase B complex product : arylsulfatase B protein_id : NP_033842.3

name	Lhfpl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369844 CCDS:CCDS26692.1 GeneID:218454 MGI:2145236
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : lipoma HMGIC fusion partner-like 2 protein_id : NP_766177.1

name	Scamp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037395 GeneID:107767 MGI:1349480
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence TAS]; GO:0030672 - synaptic vesicle membrane [Evidence IDA]; GO:0042589 - zymogen granule membrane [Evidence IDA] GO_process : GO:0006887 - exocytosis [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : secretory carrier membrane protein 1 protein_id : NP_083429.1

name	ENSMUSG00000042857 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264619 GeneID:328309 MGI:3641792
definition	codon_start : 1 product : hypothetical protein LOC328309 protein_id : XP_001472592.1

name	Ap3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753076 CCDS:CCDS26693.1 GeneID:11774 MGI:1333879
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence TAS] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0019882 - antigen processing and presentation [Evidence IMP]; GO:0048007 - antigen processing and presentation, exogenous lipid antigen via MHC class Ib [Evidence IMP]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence TAS]; GO:0051138 - positive regulation of NK T cell differentiation [Evidence IMP]; GO:0006622 - protein targeting to lysosome [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence TAS] codon_start : 1 exception : mismatches in translation note : adaptor-related protein complex AP-3, beta 1 subunit; recombination induced mutation 2 product : adaptor-related protein complex 3, beta 1 subunit protein_id : NP_033810.1

name	Tbca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678225 CCDS:CCDS26694.1 GeneID:21371 MGI:107549
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0007022 - chaperonin-mediated tubulin folding [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : cofactor A; co-chaperonin associated with a- & b-tubulin product : tubulin cofactor a protein_id : NP_033347.1

name	Otp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754958 CCDS:CCDS26695.1 GeneID:18420 MGI:99835
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : orthopedia homolog protein_id : NP_035151.1

name	Wdr41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123702001 GeneID:218460 MGI:2445123
definition	codon_start : 1 product : WD repeat domain 41 protein_id : NP_766178.2

name	Pde8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986553 GeneID:218461 MGI:2443999
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0000156 - two-component response regulator activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphodiesterase 8B protein_id : NP_758467.1

name	Zbed3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312432 CCDS:CCDS26696.1 GeneID:72114 MGI:1919364
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zinc finger, BED domain containing 3 protein_id : NP_082382.1

name	Aggf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328275 CCDS:CCDS26697.1 GeneID:66549 MGI:1913799
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0043499 - eukaryotic cell surface binding [Evidence ISS]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0007155 - cell adhesion [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0001938 - positive regulation of endothelial cell proliferation [Evidence ISS]; GO:0006396 - RNA processing [Evidence ISS]; GO:0001570 - vasculogenesis [Evidence ISS] codon_start : 1 product : angiogenic factor with G patch and FHA domains 1 protein_id : NP_079906.2

name	Crhbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259188 CCDS:CCDS26698.1 GeneID:12919 MGI:88497
definition	GO_function : GO:0017047 - adrenocorticotropin-releasing hormone binding [Evidence IDA] GO_process : GO:0042445 - hormone metabolism [Evidence IDA] codon_start : 1 product : corticotropin releasing hormone binding protein protein_id : NP_940800.1

name	S100z (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487215 GeneID:268686 MGI:2685471
definition	codon_start : 1 product : S100 calcium binding protein, zeta protein_id : NP_001074628.1

name	F2rl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982850 CCDS:CCDS26700.1 GeneID:14063 MGI:101910
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Protease-activated receptor-2 product : coagulation factor II (thrombin) receptor-like 1 protein_id : NP_032000.2

name	F2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165402 CCDS:CCDS26701.1 GeneID:14062 MGI:101802
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0015057 - thrombin receptor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : thrombin receptor product : coagulation factor II (thrombin) receptor protein_id : NP_034299.2

name	Iqgap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118344444 GeneID:544963 MGI:2449975
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005099 - Ras GTPase activator activity [Evidence IEA] GO_process : GO:0046580 - negative regulation of Ras protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : Ras GTPase-activating-like protein product : IQ motif containing GTPase activating protein 2 protein_id : NP_081987.1

name	F2rl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27819641 CCDS:CCDS26702.1 GeneID:14064 MGI:1298208
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : protease-activated receptor 3 product : coagulation factor II (thrombin) receptor-like 2 protein_id : NP_034300.2

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 4 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 3 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 2 pseudo : _no_value

name	LOC435378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435378
definition	number : 1 pseudo : _no_value

clone name	MSMg01-327F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-381L04.T7 (MSMg01no381_l04.b1)	MSMg01-381L04.TJ (MSMg01no381_l04.g1)
ACC	AG485777	AG485778
length	719	1,437
length of high quality (start - end)	484 (33 - 516)	---
definition	CHROMAT_FILE: MSMg01no381_l04.b1 PHD_FILE: MSMg01no381_l04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:23:11 2005	CHROMAT_FILE: MSMg01no381_l04.g1 PHD_FILE: MSMg01no381_l04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:23:12 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	GCGGTCGCTATACGACTCCTATTTCGAGAGGATCCGCGGAATTCCATAAT TCTAGTCGCCAGGCTGAGTTCATTACCAAATGTTGTTCTCAGAACCTTTT CTTTTCTTCAGCTCTGACTTCTGATTGGGTTCCATTCTCAGATATGTTCT TTCTCTTGGTTCTAGGATGGCTGTAACAGTTCCAGACTATATCTTTTCAG CCCCTTCTGTTCCCCCCCCCTCAGGATTCTATACAGTAATATTGTCAAAT TTCAATAAGTCTGAGATATTAGTTTCCTTCTATAAGTGAATGTTCCTGGG GAAATGATGCACAGGTCAAACCAATTAACCCAGTTCTGAAGTTCCACTCA CATCATGTAGATGAAGAAGCAAGGAAAGACATTGTCTAGAAGCAGTTTGA GATTGAAAGGGCAAAGAGAAGAGGGAAGGAGAAATAAATGCATGGCAGTC CAGTGCCAAACACAGAGACCCTCACCTAACACATGCTTATTATTATATCC ATTTGCTAGGAATTGTTTTCTTTTTTTGTAGGTGCGATTTCATTTTCACA ATATCTCTGTGAAATAACAATTTTCCCCTCCGTTCCTTCCCTTAAAGACC CTATATCTCAGATGTTATAGGTCAATGGCATAATCCATAACATTTGTCTG GTCATTGCCCATCACATACCCTCCCTTTGTACCACTTTTTAAACCTAAGG GGTACCTTTTTATCCCTTC	CTCTTATCACTGTATGCCTTTNCATTGGCCTGTATTTTCTATTGTTCCCT CCCCTACCCTCTATATGCAGCGTCCCTACACGTACGTGCGCGTTTTCGCG CGANACTTCTTATGCACTCTGTGCCGNCCGTGGAGGGTAGCGCGGTAGCA GTCGTCTAGACGTAGAGACTGATAGGCACTGTCGGCTATTTATGCTGATT TATTGTGCGATCTGACGCGACAACAGAGTGAATAGTGATACCATAAAGAC CACATCAACGAGTGTTGCTGTGTTTCGCCCGCTAGTGTCAGATGAACTGT TTACCATGCCATCACATACCAGTTGAGTGAGATATGACGTATCTGGCTTG TACGATCTACGCAGTATTGATTACGCATACATGCACACTTCTTATATGGG CTCGCATGCGATTTAGTATTACGTGGTCAATCTCAGGGTGTTGTGTGCGC NTAGCACTCCCATGATTAAGGAGTGATCATGATCGATTACATCTCCTTTA ATGCGCGACTAGTGTATTCTCTTCGCTACNATCGTAATAGATAACATACG TATGGTAGCACTGATGGTGTTGCCTGCCCCGAGATGGTGTGTCGANTATA GACAATCATGTTGTGAGTCGCCAGTCGGAAGCTCACTATGTCTACGTTGA TCTGTCTACGACNTCACATAATCGTATGTTGTGCGCTCGTTGCGCCTTGC GCACCTATAATATCTAGTATAGAAGTCACTCGCGGGTGCGAATGTCGCCG ATTGTGTGTGTGTGAGTACGGCGACTCATAAATACAGAGTCATGTTCACA TATATGAGTCATCGCCTCGCGGTCTAGTGTAGTATAGACNCTGTGTACAT CATATTCTCNTNNTNNCTTAGGTAGTCTNCNNCTTGTGTGCNTGCCGACG TATAGGCACATGCCAATATAATTTCATAATTGTATGCTTTGCTCATGCGT ATTATACGNGTGTGTCGATCNCGACACATATGTGAGACTGTGTGTGCGTT GTTATATACACAGCNCGTNGTATATCTAGCANTATAATATTCACGGCGCG ATGAGANCTCGCGATCGCGCACACCACGCTGCTTTTATATATGANGCGTG TGGCTGCGCGGTGTCATCATACGNCATTCACAGTNTGTCGTTGTCTGTAC TAAAANGTGACACTACTGTCGNGTNCGTCGATATAGGTGTCAGTTGCGAT GCAGAANTGATTGATGTCATGTCGCAGTGGTATGTTGTCTACNCTCCCCT GTCATGTGAGTGCGTGGGTCTGNNCGCNNNNCCNNNNCNNNNNCNNNNNN NNNNNNNTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAGGGNNNNNN CTAGANNNNNTNTCAGACNAGCNNCAGCGCGCTAGTCTNACGNGANTAAN ANCAGCACNTAGTCNTNCNTCNCTGTNGTTNCTAGTN
quality values	Open. Hide. 11 11 17 11 16 11 15 16 11 11 21 22 34 28 21 18 11 9 9 17 19 16 13 12 11 11 12 25 25 22 24 19 19 18 25 32 44 41 28 24 21 19 13 12 12 26 23 37 30 30 26 21 21 13 13 21 28 43 39 42 42 47 47 57 57 57 57 57 48 48 42 42 42 47 48 50 68 48 48 47 48 48 57 57 68 68 68 68 54 54 48 57 39 46 46 54 57 57 68 68 68 68 68 68 68 68 51 51 50 47 47 47 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 57 57 57 57 57 57 57 37 43 43 59 59 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 68 62 68 68 68 68 68 68 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 44 43 43 52 59 59 59 59 59 57 57 44 43 31 35 43 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 57 57 57 59 57 52 52 52 57 57 57 57 57 39 41 41 59 59 59 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 57 59 59 59 57 57 57 57 57 57 68 68 68 68 57 57 50 50 43 43 35 35 35 44 44 50 43 43 43 50 47 47 44 42 43 44 43 57 46 57 48 48 48 57 59 59 68 59 59 42 42 30 32 30 35 37 39 37 44 42 42 37 37 37 47 47 48 48 47 43 43 43 43 43 43 43 46 39 39 30 30 28 32 32 32 28 30 30 39 37 39 35 39 37 43 43 43 43 39 39 37 37 30 30 28 36 33 36 37 34 34 20 24 26 34 28 21 21 15 15 17 19 19 23 28 28 30 37 37 31 19 18 11 11 11 23 25 47 59 48 48 57 57 57 57 35 32 24 30 30 37 37 43 46 46 40 39 39 41 32 29 25 27 28 33 37 37 28 28 25 25 30 30 20 20 20 22 19 19 25 31 17 14 14 16 17 28 13 15 8 9 12 8 12 11 11 13 16 22 30 28 24 21 19 21 19 13 13 9 9 9 9 9 11 14 28 23 34 17 18 11 11 11 13 15 19 16 15 19 24 24 37 37 39 37 31 29 14 11 11 12 12 20 16 16 12 18 15 21 19 17 14 12 12 8 8 8 8 8 8 8 8 8 8 8 9 8 8 10 10 10 8 9 10 10 9 9 9 10 10 15 14 11 17 14 10 10 10 7 6 8 6 6 6 6 10 23 11 8 8 8 8 8 12 9 8 6 6 6 8 8 10 8 8 8 8 8 12 9 9 11 10 6 6 6 6 6 6 8 10 10 9 13 16 14 14 14 19 14 6 6 6 8 8 9 9 9 10 12 11 11 10 9 9 8 8 8 8 8 8 10 14 11 15 12 15 12 12 12 12 12 9 8 8 8 8 9 8 11 8 8	Open. Hide. 6 6 6 8 6 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 3 0 3 8 8 8 8 9 9 10 8 8 8 8 8 9 13 8 8 8 8 8 8 8 8 8 8 9 9 11 9 7 8 6 6 6 6 8 8 8 8 8 8 9 9 9 6 6 6 6 6 6 11 12 10 13 8 8 8 8 8 13 14 8 8 6 6 6 6 6 8 6 7 9 14 8 6 6 6 6 8 8 3 0 3 8 6 7 7 7 6 6 7 10 10 8 8 8 10 9 6 8 8 10 10 3 0 3 10 8 8 6 8 6 6 8 6 6 8 6 6 6 6 7 6 6 6 6 8 6 6 8 10 10 8 8 8 8 8 10 11 10 10 10 9 6 6 6 6 6 6 8 6 6 8 8 11 8 8 8 6 6 6 6 8 8 6 6 8 8 9 9 9 10 12 8 8 8 8 8 8 12 17 14 15 10 8 8 8 8 8 8 8 8 8 9 9 10 9 8 8 8 8 8 8 9 8 6 8 6 7 8 8 6 6 8 6 6 6 10 10 10 10 10 10 10 10 10 10 6 6 6 6 8 6 9 9 8 8 8 8 8 8 9 6 6 6 6 6 10 9 9 6 7 6 6 8 8 9 8 9 8 8 8 8 8 8 8 8 8 6 8 8 8 8 6 6 8 8 8 8 11 11 11 11 13 10 8 8 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 8 8 10 8 10 8 8 10 10 10 12 8 8 8 8 8 8 6 6 6 6 10 10 10 14 14 15 10 11 8 8 8 8 10 10 9 9 9 10 6 6 6 8 6 6 8 8 8 8 8 8 8 11 13 15 12 11 9 8 7 7 7 7 9 9 10 10 11 8 8 10 11 11 10 10 10 10 9 9 9 8 8 8 8 8 8 10 8 8 8 8 9 9 10 10 12 9 8 8 6 6 6 6 10 8 8 8 8 8 6 6 8 8 10 10 13 15 8 8 8 3 0 3 8 6 6 6 6 6 8 6 8 8 8 6 6 6 6 6 6 6 6 10 11 8 9 12 8 7 7 9 11 10 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 8 6 6 7 7 6 8 8 6 7 8 8 8 8 8 8 11 8 8 8 8 8 8 10 8 9 8 9 8 8 8 3 0 3 8 8 8 8 11 8 9 9 10 10 10 10 8 8 8 8 6 6 6 6 8 8 8 7 6 6 6 8 10 8 8 8 9 10 12 15 11 13 8 8 8 8 8 8 6 6 10 7 6 6 8 8 10 8 8 8 8 7 9 9 6 6 6 3 0 3 8 8 6 6 6 6 8 8 11 9 6 6 6 6 8 6 8 8 8 10 13 12 10 10 10 10 10 10 9 9 9 9 9 7 6 6 6 6 10 8 11 10 15 13 16 10 10 8 10 8 10 6 9 10 10 6 6 8 8 8 8 8 8 6 3 0 3 9 10 10 10 10 10 8 6 6 6 6 6 8 8 8 8 8 8 8 8 6 6 8 8 6 6 10 6 8 8 8 10 10 9 8 8 8 8 8 8 6 6 7 6 8 6 8 8 8 10 10 13 11 10 11 8 8 6 6 6 7 10 6 8 8 8 8 8 8 7 9 7 7 8 6 8 8 8 8 8 8 9 9 9 9 10 10 12 7 7 8 8 6 6 6 7 8 8 8 8 8 8 6 8 6 6 6 8 8 6 6 6 8 8 8 8 8 6 7 10 10 9 6 6 6 6 6 6 8 6 6 8 6 8 8 8 13 15 10 8 6 6 6 8 8 8 6 6 8 7 8 8 8 6 6 6 6 8 8 8 6 6 6 6 6 6 8 8 10 10 10 10 7 7 3 0 3 7 9 9 9 11 8 8 6 8 7 9 6 6 6 8 11 16 3 0 3 0 0 3 0 0 3 14 8 8 8 8 11 7 7 7 7 3 0 3 0 0 3 6 8 8 8 6 6 11 3 0 3 14 12 12 9 9 9 9 6 8 8 6 7 6 8 8 8 7 7 6 6 6 6 6 6 10 13 11 10 10 11 10 10 8 8 8 8 6 6 6 6 6 8 11 10 10 11 10 16 10 22 9 9 9 9 11 10 15 10 10 10 8 8 10 8 3 0 3 13 12 9 9 9 10 10 7 7 3 0 3 11 11 8 6 6 6 6 8 6 6 6 6 6 6 8 6 6 6 6 6 6 7 7 8 8 7 7 6 6 8 6 6 8 8 6 6 6 6 6 6 6 3 0 3 8 3 0 3 10 10 10 12 13 10 10 10 9 9 3 0 3 7 8 8 9 8 8 8 8 8 8 10 8 8 6 6 6 6 6 6 8 8 8 3 0 3 9 9 9 9 9 8 8 8 10 12 8 9 8 8 6 6 6 6 6 6 8 8 6 6 8 6 8 8 8 8 8 10 11 8 8 3 0 3 7 8 8 8 6 6 6 6 11 11 19 10 10 10 10 9 9 9 9 6 6 6 6 8 8 9 3 0 3 8 6 8 6 6 6 6 8 3 0 3 8 8 8 10 9 8 8 10 8 6 6 6 6 6 8 8 8 6 3 0 3 6 6 8 8 6 6 6 6 8 6 6 6 6 3 0 3 3 0 3 6 6 6 8 8 8 10 10 10 10 10 8 8 8 8 8 6 6 7 6 8 8 11 11 9 9 10 10 9 3 0 3 8 6 6 6 6 6 8 10 11 7 9 9 9 9 6 10 9 9 8 8 8 8 6 8 6 6 6 6 8 8 8 10 10 3 0 3 6 6 7 7 8 8 8 9 9 9 11 11 9 9 9 9 10 12 12 12 8 8 8 7 7 7 9 3 0 0 3 8 3 0 0 0 0 3 3 0 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 6 6 6 3 0 0 0 0 0 0 3 7 7 7 3 0 0 0 0 0 3 0 3 6 6 8 6 3 0 3 6 3 0 0 3 6 6 6 6 9 9 9 9 9 8 6 6 3 0 3 6 3 0 3 3 0 3 10 3 0 3 0 3 6 6 6 6 3 0 3 9 11 11 3 0 3 0 3 0 3 3 0 3 6 6 3 0 3 10 3 0 3 6 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no381_l04.b1 MSMg01no381_l04.b1 CHROMAT_FILE:
MSMg01no381_l04.b1 PHD_FILE: MSMg01no381_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:11 2005
         (484 letters)



>mm_chr13_95676518_95677399
          Length = 882

 Score =  855 bits (442), Expect = 0.0
 Identities = 470/480 (97%), Gaps = 3/480 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattc-cataattctagtcgccaggctgagttcattaccaaatgttgttctcagaacc 64
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcacataattctagtcgccaggctgagttcattaccaaatgttgttctcagaacc 264

                                                                       
Query: 65  ttttcttttcttcagctctgacttctgattgggttccattctcagatatgttctttctct 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 ttttcctttcttcagctctgacttctgattgggttccattctcagatatattctttctct 324

                                                                       
Query: 125 tggttctaggatggctgtaacagttccagactatatcttttcagccccttctgttccccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 325 tggttctaggatggctgtaacagttccagactatatcttttcagccccttctgt--cccc 382

                                                                       
Query: 185 cccctcaggattctatacagtaatattgtcaaatttcaataagtctgagatattagtttc 244
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cccctcaggatcctatacagtaatattgtcaaatttcaataagtctgagatattagtttc 442

                                                                       
Query: 245 cttctataagtgaatgttcctggggaaatgatgcacaggtcaaaccaattaacccagttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttctataagtgaatgttcctggggaaatgatgcacaggtcaaaccaattaacccagttc 502

                                                                       
Query: 305 tgaagttccactcacatcatgtagatgaagaagcaaggaaagacattgtctagaagcagt 364
           ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 503 tgaagttccactcacatcatgtagatgaagaagcagggagagacattgtctagaagcagt 562

                                                                       
Query: 365 ttgagattgaaagggcaaagagaagagggaaggagaaataaatgcatggcagtccagtgc 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 ttgagattgaaagggcaaagagaagagggaaggagaaataaatgcatggcagtccagtac 622

                                                                       
Query: 425 caaacacagagaccctcacctaacacatgcttattattatatccatttgctaggaattgt 484
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaacacagagacccacacctaacacatgcttattattatatccatttgctaggaattgt 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 882
Length adjustment: 10
Effective length of query: 474
Effective length of database: 872
Effective search space:   413328
Effective search space used:   413328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information