MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-383E19
Chromosome	13 (Build37)
Map Location	100,249,131 - 100,249,542
singlet/doublet	singlet
Overlap gene	Mtap1b
Upstream gene	LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675, Fcho2, Tnpo1, EG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797, Zfp366, Ptcd2, Mrps27
Downstream gene	Cartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs, 4 Proteins

name	LOC100039854 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC218501 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 44 ESTs, 11 Proteins pseudo : _no_value

name	Tmem174 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68344 MGI:1915594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem171 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380863 MGI:2685751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669675 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669675
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Fcho2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218503 MGI:3505790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnpo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238799 MGI:2681523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG432798 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432798 MGI:3648523
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 786 ESTs, 7 Proteins

name	LOC100039771 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	1700024P04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69382 MGI:1916632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 40 Proteins

name	LOC100039967 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	LOC100039797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Zfp366 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238803 MGI:2178429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptcd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68927 MGI:1916177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrps27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218506 MGI:1919064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17755 MGI:1306778
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cartpt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27220 MGI:1351330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mccc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78038 MGI:1925288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bdp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544971 MGI:1347077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 198 ESTs, 1 Protein

name	Serf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20365 MGI:1337114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20595 MGI:109257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Naip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17948 MGI:1298226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc1-rs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17941 MGI:109439
definition	gene_synonym : Naip-rs1 note : baculoviral IAP repeat-containing 1, related sequence 1 pseudo : _no_value

name	Naip5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17951 MGI:1298220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc1c-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53898 MGI:1858253
definition	gene_synonym : delta Naip; Naip3-ps1 note : baculoviral IAP repeat-containing 1c, pseudogene 1 pseudo : _no_value

name	Birc1f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17952 MGI:1298222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667838 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667838 MGI:3643711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins pseudo : _no_value

name	Naip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17940 MGI:1298223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2h2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23894 MGI:1345669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039665 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264628 GeneID:100039665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 64 ESTs, 4 Proteins product : similar to protein translocation complex beta subunit transcript_id : XM_001473300.1

name	LOC100039854 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264639 GeneID:100039854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039854 transcript_id : XM_001474039.1

name	Tmem174 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037110 GeneID:68344 MGI:1915594
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 174 transcript_id : NM_026685.1

name	Tmem171 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71037372 GeneID:380863 MGI:2685751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 171 transcript_id : NM_001025606.1

name	LOC669675 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264642 GeneID:669675
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC669675 transcript_id : XM_001474101.1

name	Fcho2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328382 GeneID:218503 MGI:3505790
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FCH domain only 2 transcript_id : NM_172591.2

name	Tnpo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115385967 GeneID:238799 MGI:2681523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transportin 1 transcript_id : NM_178716.3

name	Tnpo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115385965 GeneID:238799 MGI:2681523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transportin 1 transcript_id : NM_001048267.1

name	EG432798 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395601 GeneID:432798 MGI:3648523
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 786 ESTs, 7 Proteins product : predicted gene, EG432798 transcript_id : XM_484309.4

name	1700024P04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264636 GeneID:69382 MGI:1916632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 40 Proteins product : RIKEN cDNA 1700024P04 gene transcript_id : XM_001473501.1

name	Zfp366 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921300 GeneID:238803 MGI:2178429
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 366 transcript_id : NM_001004149.1

name	Ptcd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130266 GeneID:68927 MGI:1916177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pentatricopeptide repeat domain 2 transcript_id : NM_026873.2

name	Mrps27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50980302 GeneID:218506 MGI:1919064
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S27 transcript_id : NM_173757.3

name	Mtap1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678945 GeneID:17755 MGI:1306778
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 1 B transcript_id : NM_008634.1

name	Cartpt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628670 GeneID:27220 MGI:1351330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CART prepropeptide transcript_id : NM_001081493.1

name	Cartpt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948471 GeneID:27220 MGI:1351330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CART prepropeptide transcript_id : NM_013732.6

name	Mccc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116686108 GeneID:78038 MGI:1925288
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylcrotonoyl-Coenzyme A carboxylase 2 (beta) transcript_id : NM_030026.2

name	Bdp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264651 GeneID:544971 MGI:1347077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 198 ESTs, 1 Protein product : B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB transcript_id : XM_001474306.1

name	Serf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755469 GeneID:20365 MGI:1337114
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small EDRK-rich factor 1 transcript_id : NM_011353.1

name	Smn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755579 GeneID:20595 MGI:109257
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : survival motor neuron 1 transcript_id : NM_011420.1

name	Naip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754789 GeneID:17948 MGI:1298226
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, apoptosis inhibitory protein 2 transcript_id : NM_010872.1

name	Naip5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107601 GeneID:17951 MGI:1298220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, apoptosis inhibitory protein 5 transcript_id : NM_010870.2

name	Birc1f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107599 GeneID:17952 MGI:1298222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 1f transcript_id : NM_010871.2

name	Naip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431261 GeneID:17940 MGI:1298223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NLR family, apoptosis inhibitory protein 1 transcript_id : NM_008670.2

name	Gtf2h2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381243 GeneID:23894 MGI:1345669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II H, polypeptide 2 transcript_id : NM_022011.3

name	LOC100039665 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264629 GeneID:100039665
definition	codon_start : 1 product : similar to protein translocation complex beta subunit protein_id : XP_001473350.1

name	LOC100039854 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264640 GeneID:100039854
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474089.1

name	Tmem174 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037111 CCDS:CCDS26715.1 GeneID:68344 MGI:1915594
definition	codon_start : 1 product : hypothetical protein LOC68344 protein_id : NP_080961.1

name	Tmem171 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71037373 CCDS:CCDS26716.1 GeneID:380863 MGI:2685751
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 171 protein_id : NP_001020777.1

name	LOC669675 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264643 GeneID:669675
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474151.1

name	Fcho2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369848 GeneID:218503 MGI:3505790
definition	GO_process : GO:0051301 - cell division [Evidence IEA] codon_start : 1 product : Fcho2 protein_id : NP_766179.1

name	Tnpo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115385968 CCDS:CCDS26717.1 GeneID:238799 MGI:2681523
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0000059 - protein import into nucleus, docking [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; karyopherin (importin) beta 2 product : transportin 1 isoform 1 protein_id : NP_848831.2

name	Tnpo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115385966 GeneID:238799 MGI:2681523
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0000059 - protein import into nucleus, docking [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; karyopherin (importin) beta 2 product : transportin 1 isoform 2 protein_id : NP_001041732.1

name	EG432798 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82951993 GeneID:432798 MGI:3648523
definition	codon_start : 1 product : similar to ribosomal protein L27A protein_id : XP_484309.2

name	1700024P04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264637 GeneID:69382 MGI:1916632
definition	codon_start : 1 product : histone variant H2bl1 protein_id : XP_001473551.1

name	Zfp366 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921301 CCDS:CCDS26720.1 GeneID:238803 MGI:2178429
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 366 protein_id : NP_001004149.1

name	Ptcd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037131 CCDS:CCDS26721.1 GeneID:68927 MGI:1916177
definition	codon_start : 1 product : pentatricopeptide repeat domain 2 protein_id : NP_081149.1

name	Mrps27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50980303 CCDS:CCDS26722.1 GeneID:218506 MGI:1919064
definition	GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein S27 protein_id : NP_776118.2

name	Mtap1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678946 CCDS:CCDS26723.1 GeneID:17755 MGI:1306778
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence TAS] [Evidence IEA] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence TAS] [Evidence IEA] GO_process : GO:0016358 - dendrite development [Evidence IMP]; GO:0001578 - microtubule bundle formation [Evidence IMP]; GO:0007017 - microtubule-based process [Evidence TAS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : microtubule-associated protein 5 product : microtubule-associated protein 1 B protein_id : NP_032660.1

name	Cartpt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125628671 GeneID:27220 MGI:1351330
definition	GO_function : GO:0005184 - neuropeptide hormone activity [Evidence TAS] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence TAS]; GO:0046850 - regulation of bone remodeling [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; cocaine and amphetamine regulated transcript product : cocaine and amphetamine regulated transcript isoform 2 protein_id : NP_001074962.1

name	Cartpt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948472 GeneID:27220 MGI:1351330
definition	GO_function : GO:0005184 - neuropeptide hormone activity [Evidence TAS] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence TAS]; GO:0046850 - regulation of bone remodeling [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; cocaine and amphetamine regulated transcript product : cocaine and amphetamine regulated transcript isoform 1 protein_id : NP_038760.3

name	Mccc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73622267 GeneID:78038 MGI:1925288
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004485 - methylcrotonoyl-CoA carboxylase activity [Evidence IEA] codon_start : 1 product : methylcrotonoyl-Coenzyme A carboxylase 2 (beta) protein_id : NP_084302.1

name	Bdp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264652 GeneID:544971 MGI:1347077
definition	codon_start : 1 product : B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB protein_id : XP_001474356.1

name	Serf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755470 GeneID:20365 MGI:1337114
definition	codon_start : 1 note : modifier of spinal muscular atrophy candidate 1 product : small EDRK-rich factor 1 protein_id : NP_035483.1

name	Smn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755580 CCDS:CCDS26725.1 GeneID:20595 MGI:109257
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 note : survival of motor neuron protein product : survival motor neuron 1 protein_id : NP_035550.1

name	Naip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754790 CCDS:CCDS26726.1 GeneID:17948 MGI:1298226
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0006952 - defense response [Evidence IEA]; GO:0002217 - physiological defense response [Evidence IEA] codon_start : 1 exception : mismatches in translation note : neuronal apoptosis inhibitory protein, related sequence 6; neuronal apoptosis inhibitory protein 2; baculoviral IAP repeat-containing 1b protein product : baculoviral IAP repeat-containing 1b protein_id : NP_035002.1

name	Naip5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107602 CCDS:CCDS26727.1 GeneID:17951 MGI:1298220
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein, related sequence 3; neuronal apoptosis inhibitory protein 5 product : baculoviral IAP repeat-containing 1e protein_id : NP_035000.2

name	Birc1f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107600 CCDS:CCDS26728.1 GeneID:17952 MGI:1298222
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein, related sequence 4; neuronal apoptosis inhibitory protein 6 product : baculoviral IAP repeat-containing 1f protein_id : NP_035001.2

name	Naip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431262 CCDS:CCDS26729.1 GeneID:17940 MGI:1298223
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : neuronal apoptosis inhibitory protein 1 product : baculoviral IAP repeat-containing 1a protein_id : NP_032696.2

name	Gtf2h2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981225 CCDS:CCDS26730.1 GeneID:23894 MGI:1345669
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : basal transcription factor 2, p44 subunit; general transcription factor IIH, polypeptide 2 (44 kDa subunit); general transcription factor II H, polypeptide 2 (44 kDa subunit) product : general transcription factor II H, polypeptide 2 protein_id : NP_071294.2

name	LOC100039771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039771
definition	number : 1 pseudo : _no_value

name	LOC100039771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039771
definition	number : 2 pseudo : _no_value

name	LOC100039797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039797
definition	number : 5 pseudo : _no_value

name	LOC100039797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039797
definition	number : 4 pseudo : _no_value

name	LOC100039797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039797
definition	number : 3 pseudo : _no_value

name	LOC100039797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039797
definition	number : 2 pseudo : _no_value

name	LOC100039797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039797
definition	number : 1 pseudo : _no_value

name	LOC218501 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264641 GeneID:218501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 44 ESTs, 11 Proteins product : similar to calponin 3, acidic pseudo : _no_value transcript_id : XR_031538.1

name	LOC100039967 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264646 GeneID:100039967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to Ribosomal protein L17 pseudo : _no_value transcript_id : XR_031603.1

name	EG667838 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264657 GeneID:667838 MGI:3643711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : predicted gene, EG667838 pseudo : _no_value transcript_id : XR_002085.2

clone name	MSMg01-266B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519N06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-322J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-169M12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-289P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-508K12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-055N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-322M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-539G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-383E19.T7 (MSMg01no383_e19.b1)	MSMg01-383E19.TJ (MSMg01no383_e19.g1)
ACC	AG487001	AG487002
length	773	753
length of high quality (start - end)	417 (34 - 450)	405 (69 - 473)
definition	CHROMAT_FILE: MSMg01no383_e19.b1 PHD_FILE: MSMg01no383_e19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:25:19 2005	CHROMAT_FILE: MSMg01no383_e19.g1 PHD_FILE: MSMg01no383_e19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:25:19 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTGTCGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCATGTGA AATCTTTGCTATAAATGGTGTTAACACCTTTATAGCCAACTGGTCTTCCG TTTAGGAAACCTACGGGTCTTTGAATTTGGGTGGTTTTCCCTCCTCAGTA AGGAAAGAGAGTTTTGGAGACCAAAAATGAACTCTGTTCTGCAGACACCA GTGGAATCTCATGCTAACTTTTGACTTGAGCTGGCTAGAGGCCTTGTCTC TCGCATGTAATGCTGTCAGAGATGACCATAAGCAGGAACCTCGTCTGGCG AGTCCATTCCGTCGTCAGCAGACTTCCCAGCAGCAAAGCCAGCTCCACTG CACGCAGTAGCCCCAGCTTTCTCCCCTGACATGATGTGTAAGCCCTACTT CCCACCTGGCCACCAGAACACACCACTCATCTGCCACCTGTGGTAGGAAG AAAGAGTGGGAGGGGACAGACAGAGTGGGCACAGCCAGCAGTGTCCTCTG CCAGTCTTGCCAAGAGCCGGGCATTTGCAGCCACTAATCCTCTCTCTTTG GAAACCTGAAGAAAGGGACTGGCTCCTGAAAAACCCTTTCCCGGAGAAAA ATTCTGGGAATGCGGGATAAAGGGGAAAAGTGGGCTTTTTAAGTTTTATC CCGTCTTTTCTCAATAACAGATTTTAAAGGGGGTTTTCTCCCAAAAGAAA AAGGGAAGCTTTTGCTAAAATCTGGGAATTGGGGAGAGGGGTATATGGAC CCACTCTTCTATTCCCGCGCGGT	CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXTTTGTTAAGCTCTGTACCCCATTTTTAATGGG GTTATTTGATTTTTTTGCAGTCCACCTTCTTGAGTTCTTTATATATATTG GATATTAGTCCCCTATCTGAATTAGGATAGGTAAAGATCCTTTCCCAATC TGTTGGTGGCCTTTTTGTCTTATTGACGATGGAATACTTTTTTTGTAACT CAATTAATCAACTTTTGTAACCCACTGAATCTAATTAGGGCTGCCCATAT GTACATGGCTAAAGGTCTTTCAGGGGAACATGGGAAAACCTACCAGGAGC CATGTCCTCAAAGGTAAAGGACTCTCTCTCCCACAAGAAGCTATTAACTG CCAATGGCTTCTCTGCTAGTGGTGGGGCCTTGTGAACCCCTTCCCAACCT CTATTGGAACAATGACTGGCTTGATCTAGTGCAGATCTTGTGGAAGCAGT CCCTGGCTCTCTGAGTTCCTGAGTGGAGCAGCCCTGTTGTGTTCAAAGAA CCTTTTTTTTTGTATAAAACTCTTGAAATTGGGCCTTAAATCTGGCTAAC CCAATTCCGAAGATCTTTGGCCCCGCTTGGAAGAGGTGTTTTTTATATAT TTTTTATTTGCCCACCATACCCCCCTTTTTTTCTTTTCCTTTATATCCTT ATTTTCTCTTTTTTCTCTTCTTTTTTTTTCTTATATTTTCTTTCATATTA TAC
quality values	Open. Hide. 8 8 8 8 8 9 12 15 17 24 22 29 37 37 23 17 15 12 14 22 25 13 11 11 11 11 11 15 22 22 22 18 14 13 22 30 39 39 28 23 22 30 32 30 30 33 33 46 41 37 28 19 23 22 24 24 28 28 37 43 57 57 57 50 50 50 47 43 43 43 51 53 51 51 48 48 48 42 57 57 68 68 68 68 47 48 47 47 47 50 59 59 57 57 54 57 57 57 59 68 68 59 59 59 68 68 68 59 59 59 57 59 57 59 59 54 57 57 57 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 57 57 59 59 59 59 59 57 57 57 52 52 52 57 59 57 57 57 57 57 68 59 59 57 57 54 54 50 50 57 57 57 68 57 57 57 57 57 59 57 57 68 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 59 68 68 68 68 68 68 68 59 59 59 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 68 68 68 68 59 59 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 68 68 57 57 57 57 57 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 43 43 43 50 43 48 57 59 57 68 68 57 57 57 57 57 59 57 57 57 57 68 68 68 68 57 57 54 54 57 57 59 48 57 48 57 59 59 59 59 59 54 57 57 59 59 57 57 57 47 48 48 57 57 54 59 59 59 59 59 59 59 59 59 57 57 48 42 42 48 48 50 57 57 48 48 48 48 48 59 59 59 57 59 59 57 57 48 48 48 48 41 41 41 41 36 59 24 19 18 31 31 34 31 34 34 28 32 39 43 43 50 50 48 48 41 41 41 41 32 32 20 18 18 31 24 30 34 25 18 14 19 26 35 31 23 28 18 20 18 28 24 21 14 12 12 10 13 22 37 22 22 20 20 18 18 19 24 12 12 12 21 18 20 20 22 24 28 32 36 36 37 35 31 31 31 32 23 13 11 11 11 16 11 18 23 15 15 11 11 10 10 8 8 8 8 8 7 7 6 6 8 8 9 8 8 8 9 8 9 16 33 24 20 16 11 11 10 13 10 8 8 8 11 8 9 10 10 8 8 8 11 8 8 8 8 8 7 6 7 7 9 7 7 6 6 8 8 8 10 10 12 10 10 10 12 9 9 9 10 6 6 6 6 6 8 8 9 8 7 6 6 6 10 8 10 10 10 10 12 10 10 9 9 9 9 12 10 8 8 8 8 8 8 9 9 8 8 8 6 8 6 6 8 8 9 9 9 8 8 8 8 8 8 8 10 8 10 10 10 10 12 11 11 12 12 10 9 8 12 8 10 11 12 12 15 11 10 8 8 8 8 8 8 8 8 7 8 8 8 8 12 8 8 6 6 6 6 6 8 8 8 9 9 9 9 12 10 11 11 12 12 12 14 8 7 7 7 10 12 12 12 12 12 11 11 10 10 10 10 9 10 10 10 9 8 8 9 10 10 10 15 10 10 9 9 11 11 8 8 8 8 10 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 11 10 10 10 8 8 8 8 9 9 11 11 11 10 10 8 8 8 8 8 8 8 8 8	Open. Hide. 6 6 8 7 7 6 6 8 14 12 20 15 23 24 22 27 27 31 25 25 30 29 29 25 19 10 9 9 9 9 9 9 9 11 10 10 10 10 12 17 32 28 30 28 28 33 33 42 42 41 44 34 34 22 14 7 6 6 6 6 7 8 3 0 3 15 15 25 30 30 36 41 48 48 53 59 57 57 57 57 57 53 57 57 57 57 57 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 68 68 59 48 44 36 19 16 12 12 24 32 44 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 57 57 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 41 41 43 46 57 46 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 50 50 50 50 50 39 30 26 12 16 10 9 8 8 8 8 8 11 23 25 30 33 33 33 50 44 50 50 57 57 50 48 57 57 57 57 57 57 57 48 48 57 57 48 48 43 43 39 43 43 46 37 41 30 30 41 41 48 43 43 43 57 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 59 59 59 59 59 59 59 59 59 59 44 39 37 37 39 39 35 35 32 37 37 41 39 37 41 39 43 39 46 47 46 40 39 37 37 35 35 36 31 41 36 36 36 39 37 31 37 37 35 35 35 39 39 37 37 44 40 37 19 15 15 12 12 15 18 25 37 39 39 47 37 28 18 14 19 14 15 17 30 30 37 30 30 28 31 12 13 8 8 8 10 12 16 13 10 15 11 8 8 11 14 11 11 11 11 17 8 8 8 8 8 8 8 13 17 15 15 11 15 15 23 21 17 16 11 9 8 8 12 12 8 8 15 15 19 13 11 8 8 8 8 8 9 10 10 8 8 8 8 10 9 9 9 8 8 6 6 6 6 8 8 10 9 9 9 10 12 12 12 21 28 34 29 28 23 23 19 15 15 11 11 11 10 10 10 10 10 10 10 9 11 11 11 10 10 12 16 10 9 10 10 8 8 8 8 8 8 8 8 9 9 9 10 9 9 9 9 10 9 11 11 15 18 19 11 11 11 11 11 9 9 9 9 10 10 10 10 9 10 11 10 9 9 11 10 9 9 10 8 10 7 6 8 6 6 8 13 14 12 13 21 9 9 9 9 9 9 22 24 21 8 8 6 6 10 8 9 9 10 9 8 8 6 6 8 8 8 10 10 11 11 10 10 10 14 14 16 14 12 19 8 8 8 10 8 8 8 8 10 10 8 11 8 8 8 8 8 9 9 10 10 12 10 8 8 8 10 10 10 8 8 8 8 8 9 11 11 9 9 9 10 10 9 9 9 12 9 10 10 10 10 8 8 8 8 9 9 9 8 8 8 8 8 10 10 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no383_e19.b1 MSMg01no383_e19.b1 CHROMAT_FILE:
MSMg01no383_e19.b1 PHD_FILE: MSMg01no383_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:19 2005
         (417 letters)



>mm_chr13_100248926_100249742
          Length = 817

 Score =  789 bits (408), Expect = 0.0
 Identities = 411/412 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcatgtgaaatctttgctataaatggtgttaacacctttatagccaactggtcttc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcatgtgaaatctttgctataaatggtgttaacacctttatagccaactggtcttc 265

                                                                       
Query: 66  cgtttaggaaacctacgggtctttgaatttgggtggttttccctcctcagtaaggaaaga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cgtttaggaaacctacgggtctttgaatttgggtggttttccctcctcagtaaggaaaga 325

                                                                       
Query: 126 gagttttggagaccaaaaatgaactctgttctgcagacaccagtggaatctcatgctaac 185
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 326 gagttttggagaccaaaaatgaactctgttctgcagacaccagtggaatctcgtgctaac 385

                                                                       
Query: 186 ttttgacttgagctggctagaggccttgtctctcgcatgtaatgctgtcagagatgacca 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttttgacttgagctggctagaggccttgtctctcgcatgtaatgctgtcagagatgacca 445

                                                                       
Query: 246 taagcaggaacctcgtctggcgagtccattccgtcgtcagcagacttcccagcagcaaag 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taagcaggaacctcgtctggcgagtccattccgtcgtcagcagacttcccagcagcaaag 505

                                                                       
Query: 306 ccagctccactgcacgcagtagccccagctttctcccctgacatgatgtgtaagccctac 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccagctccactgcacgcagtagccccagctttctcccctgacatgatgtgtaagccctac 565

                                                               
Query: 366 ttcccacctggccaccagaacacaccactcatctgccacctgtggtaggaag 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ttcccacctggccaccagaacacaccactcatctgccacctgtggtaggaag 617


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space:   329664
Effective search space used:   329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information