Query= MSMg01no383_g12.b1 MSMg01no383_g12.b1 CHROMAT_FILE:
MSMg01no383_g12.b1 PHD_FILE: MSMg01no383_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:27 2005
(520 letters)
>mm_chr13_47642109_47643028
Length = 920
Score = 938 bits (485), Expect = 0.0
Identities = 509/517 (98%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 5 gaattccacacttgtcc-cacctggtaaaagtgttttgttttgtccaaaggctcttgatg 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacacttg-ccacacctggtaaaagtgttttgttttgtccaaaggctcttgatg 263
Query: 64 ctggagaattcagcatttcatgccttacagtctagcagatgcgaggtttaggcaatttga 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 ctggagaattcagcatttcatgccctacagtctagcagatgcgaggtttaggcaatttga 323
Query: 124 acttttagaaattttcttcttttctgagatgaaataagtctccatgatcactagttatga 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 acttttagaaattttcttctttactgagatgaaataagtctccatgatcactagttatga 383
Query: 184 tgtttgggatcaaatgcatgaaactgtaggtaatctttacttcacagcatgtatataagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtttgggatcaaatgcatgaaactgtaggtaatctttacttcacagcatgtatataagc 443
Query: 244 caaacatttatatgatggttgcattatattacttgtctgtgactaagtcttgtaatgtag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaacatttatatgatggttgcattatattacttgtctgtgactaagtcttgtaatgtag 503
Query: 304 gtagttaggtatgcttcccatataatgagtataaattgaagaccgggtgatgacttggtg 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcagttaggtatgcttcccatataatgagtataaattgaagaccgggtgatgacttggtg 563
Query: 364 ggtacaatgccttccatataagtctgaggactggagttcagaagttaaagcccacataca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtacaatgccttccatataagtctgaggactggagttcagaagttaaagcccacataca 623
Query: 424 tgccaggtaggcatagcatcctttgtgcaactttagagataggtgatctctggagaaagc 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 624 tgccaggtaggcatagcatcctttgtgcaactttagagataggtgatccctggagcaagc 683
Query: 484 tgtctagttacattaactggataagcaagtcctgtgt 520
|||||||||||| ||||||||||||||||||||||||
Sbjct: 684 tgtctagttacagtaactggataagcaagtcctgtgt 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_g12.g1 MSMg01no383_g12.g1 CHROMAT_FILE:
MSMg01no383_g12.g1 PHD_FILE: MSMg01no383_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:27 2005
(504 letters)
>mm_chr13_47816609_47817512
Length = 904
Score = 975 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Minus
Query: 1 taggttttttttttcctgttgcatgtgtgttaacagaaaagggaggttttctagagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taggttttttttttcctgttgcatgtgtgttaacagaaaagggaggttttctagagaaga 645
Query: 61 gctcatggaggaaggcagtggggtagggaatggcccaagaaagtgtactagaaacccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gctcatggaggaaggcagtggggtagggaatggcccaagaaagtgtactagaaacccaaa 585
Query: 121 cccactataataagcagagactcaaacaacactggccaaatagaaaagtctccccattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cccactataataagcagagactcaaacaacactggccaaatagaaaagtctccccattcc 525
Query: 181 ctttcaatgatctatgcagaagaccgagactagcactgttgttaaactcatgagatcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctttcaatgatctatgcagaagaccgagactagcactgttgttaaactcatgagatcaca 465
Query: 241 taaagaccgaaagctcatattatgttcagaatccaagtactttgaatgtggctaaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 taaagaccgaaagctcatattatgttcagaatccaagtactttgaatgtggctaaggtta 405
Query: 301 ccatcagtgactataattccatgtgccatgtaccactgcagagtctaagtctgttctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ccatcagtgactataattccatgtgccatgtaccactgcagagtctaagtctgttctgag 345
Query: 361 aagcctcatggctcccacctggtaatgcattggttcctacaaggtatccaataggtgact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aagcctcatggctcccacctggtaatgcattggttcctacaaggtatccaataggtgact 285
Query: 421 attgatcccacagacttgtgtcaagctgttactggtctaaactagctgtgtatatgacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 attgatcccacagacttgtgtcaagctgttactggtctaaactagctgtgtatatgacta 225
Query: 481 aatctttaggttacctgttactaa 504
||||||||||||||||||||||||
Sbjct: 224 aatctttaggttacctgttactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
