Query= MSMg01no384_k02.b1 MSMg01no384_k02.b1 CHROMAT_FILE:
MSMg01no384_k02.b1 PHD_FILE: MSMg01no384_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:58 2005
(628 letters)
>mm_chr13_85853743_85854770
Length = 1028
Score = 1168 bits (604), Expect = 0.0
Identities = 619/624 (99%)
Strand = Plus / Minus
Query: 5 gaattctctaatattcctatcatttactttaccttgtatccatactgtgatgttctcagg 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gaattctctaaaatttctatcatttactttaccttgtatccatactgtgatgttctcagg 769
Query: 65 aggctaataccaattattatacttaaaattacacaacttacaagaccacaaaatttaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 aggctaataccaattattatacttaaaattacacaacttacaagaccacaaaatttaact 709
Query: 125 cttttttataaccatgaggatcaagaagtaaccattcagacactagacaccctaacctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cttttttataaccatgaggatcaagaagtaaccattcagacactagacaccctaacctca 649
Query: 185 agtcttctggttaagagcttctctaggctgaacttgagaaggttacagttcaggaaagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agtcttctggttaagagcttctctaggctgaacttgagaaggttacagttcaggaaagac 589
Query: 245 ccatattcttcattactcctagcttgtatgctctcatgttgcttttaaaatattatgaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ccatattcttcattactcctagcttgtatgctctcatgttgcttttaaaatattatgaat 529
Query: 305 atttcatctatttctgtgcaaacacaataaatatgctgtttgtactttttacattggact 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 528 atttcatctatttctgtgcaaacacaataaatatgctatttgtactttttacattggact 469
Query: 365 tttgaccaactgaataatcttcctgtgcaaatgacataatgtaggatttatttattcatt 424
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 468 tttgaccaactgaataatcttcctgtgcaaatgacataatgtaggctttatttattcatt 409
Query: 425 gatgaacaactgaagttaaaaaggtagttctcctgtgtgcatgcttaaatctacatccta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gatgaacaactgaagttaaaaaggtagttctcctgtgtgcatgcttaaatctacatccta 349
Query: 485 tctgatctttttgacttactgaaaaaaacattaccctgatccccaatggagaaatttcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 348 tctgatctttttgacttactgaaaaaaacattaccctgatccccaatggaggaatttcat 289
Query: 545 ttatgtagaagcaagaaactcaacgatggctttaggatgtagctcaggggtgaaatactt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttatgtagaagcaagaaactcaacgatggctttaggatgtagctcaggggtgaaatactt 229
Query: 605 gtctgatatatacaagagttaaga 628
||||||||||||||||||||||||
Sbjct: 228 gtctgatatatacaagagttaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_k02.g1 MSMg01no384_k02.g1 CHROMAT_FILE:
MSMg01no384_k02.g1 PHD_FILE: MSMg01no384_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:58 2005
(551 letters)
>mm_chr13_85679362_85680313
Length = 952
Score = 1029 bits (532), Expect = 0.0
Identities = 547/552 (99%), Gaps = 1/552 (0%)
Strand = Plus / Plus
Query: 1 taggagtgacagcaagccgacctactcatgtgctacttagctagctctctgc-tgctcat 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 taggagtgacagcaagccgacctactcatgtgctacttagctagctctctgcctgctcat 260
Query: 60 tcatgtgagctacaagatttgtgttttttaacaactagactgatacatgtacctagttcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatgtgagctacaagatttgtgttttttaacaactagactgatacatgtacctagttcc 320
Query: 120 tggtattttcacctgctctctactaatttccttcttcacttgctccatttctgcttccag 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tggtattttcacctgctctctactaatttccttcttcaattgctccatttctgcttccag 380
Query: 180 catatgctctgacagactcccaggaagacagctcctgcttcaggtcagggctagaaaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catatgctctgacagactcccaggaagacagctcctgcttcaggtcagggctagaaaagt 440
Query: 240 gggaaagcatggagaacacatgaaatgacttgatgcccattcatgaacactgacccagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggaaagcatggagaacacatgaaatgacttgatgcccattcatgaacactgacccagac 500
Query: 300 actggtctggagaatgaggacaacagtgtgatagaagataacgtcctgagatagaagata 359
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actggtctggagaattcggacaacagtgtgatagaagataacgtcctgagatagaagata 560
Query: 360 acgccctgaggttatgattttgctcttctcggggaaaagagatgtatcagtgttttctaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgccctgaggttatgattttgctcttctcggggaaaagagatgtatcagtgttttctaa 620
Query: 420 caaacacatccttattcaatttaaaacttttaactgttgtgagcgttccatagcctcagt 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 caaacacatccttattcaatttaaaacttttaactgttgtgagcgctccatagcctcagt 680
Query: 480 aatagtgtcaggccttgggacctccccttgatctggaccccactttgggcctgtcgctgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatagtgtcaggccttgggacctccccttgatctggaccccactttgggcctgtcgctgg 740
Query: 540 accttcttttcc 551
||||||||||||
Sbjct: 741 accttcttttcc 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 952
Length adjustment: 10
Effective length of query: 541
Effective length of database: 942
Effective search space: 509622
Effective search space used: 509622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
