TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCTGTCCTGAGCCCCATTTTTTAATGGGGTTATTCGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGGCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTTTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTTT
GAGGTCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTACTGTTC
TATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTAACTACT
TTCTCCTCAATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGAT
CCACTTAGATTTGACCTTAGTACAATGAGATAGGAATGGATCAATTCTCA
ATCTTCTACATGATAACAGCCAGTTGTGCCAGCAACATTTGTTGAAAATG
CTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATCTCTGGGTCTTCAATTCTGTTCCATTGGT
CTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTTATCACTATTGC
TCTGTAGTACAGCTTTAGGTCAGGCATGATGATTCCATCTTTTATCCTTG
AGAAGAGATTTTGCTATCCTAGGTTTTTTGTTATTCCTGATGAAT

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTTCGAAAAAATCAGAGGTACACAGACAAGAACACTTTACAGCT
TTGGCCAGTGAAATTGCCTCATCAGGTGCTGTCGCATGCATTGCTGTTTG
TTTTTTCTTTTTCCAGTGAGGAAAAATGAAGCAGAATGTTGTAAGTTATT
CTGCCATACAACCCTCAAACATATTTGAAAGTGACAAAAAAATCTTGAAA
TATTGATTATTTATTTACCCTCATACGGAAACCAAGCTACTCACTGAAGT
GGCTTTGATTTGGAATTTTTTTTGGTCTGACAGCACATGAAAGGATTAAT
TATTTTATAGATACTGTTGACAGGTAGCATGGAATGGTTTCTGCCCTACC
TGCAGCTGATACTGAAGATCATGAGGCAGGTAAAACTCCAAAACCGGGTG
CATATGCACCCCGTTGTGATGATGTACCCCAACACAGCTGGAAAGAAAAG
CTGCTAGTTCAAGATACCAGCAAGTCCAAAGTTTGGGAGGAAGAAACACA
GTGGATAAAACTGAAGAACAAAAAAAAGCAACATGGCTAAAGCCCATGCA
TACAGCTAGAAAGGAGAAGTAGGGTGAGAGAGTAGCTGATATTTAAGTGA
TTGTTTTCCACTCTCAAGCTAACACAGAGAGGGTGGGAGCTCAGGAGACT
TANACACTATACAAAGAACTTAGGCAACCACAGAATGCTGAGAG

Query= MSMg01no386_c16.g1 MSMg01no386_c16.g1 CHROMAT_FILE:
MSMg01no386_c16.g1 PHD_FILE: MSMg01no386_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:55 2005
         (674 letters)



>mm_chr13_26608457_26609531
          Length = 1075

 Score = 1214 bits (628), Expect = 0.0
 Identities = 663/675 (98%), Gaps = 1/675 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaggtacacagacaagaacactttacagctttggccagtgaaattgcctcatcaggtgct 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gaggtacacagacaggaacactttacagctttggccagtgaaattgcctcatcaggtgct 736

                                                                       
Query: 61  gtcgcatgcattgctgtttgttttttctttttccagtgaggaaaaatgaagcagaatgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtcgcatgcattgctgtttgttttttctttttccagtgaggaaaaatgaagcagaatgtt 676

                                                                       
Query: 121 gtaagttattctgccatacaaccctcaaacatatttgaaagtgacaaaaaaatcttgaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtaagttattctgccatacaaccctcaaacatatttgaaagtgacaaaaaaatcttgaaa 616

                                                                       
Query: 181 tattgattatttatttaccctcatacggaaaccaagctactcactgaagtggctttgatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tattgattatttatttaccctcatacggaaaccaagctactcactgaagtggctttgatt 556

                                                                       
Query: 241 tggaattttttttggtctgacagcacatgaaaggattaattattttatagatactgttga 300
           ||||| |  |   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tggaagtagtcagggtctgacagcacatgaaaggattaattattttatagatactgttga 496

                                                                       
Query: 301 caggtagcatggaatggtttctgccctacctgcagctgatactgaagatcatgaggcagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 caggtagcatggaatggtttctgccctacctgcagctgatactgaagatcatgaggcagg 436

                                                                       
Query: 361 taaaactccaaaaccgggtgcatatgcaccccgttgtgatgatgtaccccaacacagctg 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 435 taaaactccaaaaccgggtgcatatgcaccccgttgtgatgatgcaccccaacacagctg 376

                                                                       
Query: 421 gaaagaaaagctgctagttcaagataccagcaagtccaaagtttgggaggaagaaacaca 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 375 gaaagaaaagctgctagttcaagatcccagcaagtccaaagtttgggaggaagaaacaca 316

                                                                       
Query: 481 gtggataaaactgaagaac-aaaaaaaagcaacatggctaaagcccatgcatacagctag 539
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtggataaaactgaagaacaaaaaaaaagcaacatggctaaagcccatgcatacagctag 256

                                                                       
Query: 540 aaaggagaagtagggtgagagagtagctgatatttaagtgattgttttccactctcaagc 599
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaaggagaagtggggtgagagagtagctgatatttaagtgattgttttccactctcaagc 196

                                                                       
Query: 600 taacacagagagggtgggagctcaggagacttanacactatacaaagaacttaggcaacc 659
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 195 taacacagagagggtgggagctcaggagacttaaacactatacaaagaacttaggcaacc 136

                          
Query: 660 acagaatgctgagag 674
           |||||||||||||||
Sbjct: 135 acagaatgctgagag 121


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space:   707160
Effective search space used:   707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)